Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6689 |
Symbol | |
ID | 4454220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 920522 |
End bp | 922003 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698751 |
Product | major facilitator transporter |
Protein accession | YP_840311 |
Protein GI | 116687064 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGGA ATGACCCCGT ATCACCCGAC CCGCGTCGCT GGGCCATGTT TTCGGTCCTG CTCGTCGGCG CGTTCCTGCC GCCGCTGGAT TTCTTCATCG TCAATGTCGC CCTGCCGTCG ATTCGCGCGG AACTGGGCGC CTCGTCGTCG GCCGAGCAAC TCGTCATTTC GTCGTATGCG GGCCTGTACG CGGTGACGCT GATCACCGGC GGACGATTGG GCGACCTGTT CGGCCGCGGG CGCGTGTTTT TCCTCGGCTT GATCGGCTTT GCGATCGCCT CGACGCTGTG CGGCCTCGCG AGTTCGCCGT GGACGCTCAT CGTCGGCCGC GCGTTGCAGG GCGTGACGGC CGCGATCATG GCGCCGCAGG CGCTCGCGTC GATCCAGGCG ATCTTTCCCG AATCGGAAAA GCCGCTCGCG CTCAGCCTGT ACGGCGCGGT ATTCGGCCTC GCCGCCGTGG TCGGGCAGGC GCTGGGCGGG ATCCTGATCT CGCTGAATCT GTTGAACCTC GGCTGGCGCA CGATCTTCCT CGTCAACCTG CCGCTGGCGA TTCTGGTCGT CCTGTTCGGG ATTCCGCTGC TGAAGGAAAC GCGTGCACAG CATGCGCGCA AGCTCGACCT CGGCGGCACC GCGCTATCGA TGCTGACACT GGGCGCGCTG ATCGTGCCGC TGATCGAGGG GCGCGAAGCG AGCTGGCCGG CATGGGCATG GGTGTCGCTG CTCGCGGTGC CGGCCCTCGC GTGGGGCTTC TGGCGCTACG AGCGCCGGCT GGGCAGCCGC GGCGGCGCAC CGCTGCTCGA CCCGACCGCG CTCCGAGCCC CGGGGCTGGG CCGGGCGTTG CTGATCGCGC TGCTGCTGTA CTCGATCGGC ACGTTCTTCC TGCTGTTCTC CGTGTATCTG CAGAATGCAT TGCACGTCGA CGCGCTGAGC GCGGGCCTCG TGTTCCTGCC GTTCGGCGTG GGGTTCCTGC TCGGCCCGCT GTCGACGCCT GTCTGCTCGC GTGTCATCGG CGCTTACGTC AATCCGTTCG GCATGAGCCT GGAGATCGTC GGGCTCGTCG GCCTCGCGTG GTTGATCGAC GTCACGCCGG TCGGGATGCC GCTCACTGCC GTGCCGCTCA CCGTCGTTCT CTTCGTCATC GGTTTCGGAC AAGGCCTCGC GCTGCCGACC CTGATGCGCA TGGTGACGGG GCGCGTCGCA CCGGCGCTGT CCGGCATGAT CGCCGGCATC GTCAGCTCGA CGCTGCAGGT CAGCACGTCG CTCAGCGTGG CGATCATCGG CGGAATTTTC TATACGGTGC TCGGCACGCG CCAGGACCCG GCGGCCATCG CGCATGCGTT CATCGTCGCA CTCCTGTCGA TCTCGTCGTT CCTCGCCATC GGCGCCGCGC TGGGCCTCTC GCTCGCTCGT GCACCCGCCG CGCCCCCCTC GCTGCCGGCC GCTGCCCGGC CGACCTTCGG CCCGGCGCGC AAACGGCCGT GA
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Protein sequence | MSRNDPVSPD PRRWAMFSVL LVGAFLPPLD FFIVNVALPS IRAELGASSS AEQLVISSYA GLYAVTLITG GRLGDLFGRG RVFFLGLIGF AIASTLCGLA SSPWTLIVGR ALQGVTAAIM APQALASIQA IFPESEKPLA LSLYGAVFGL AAVVGQALGG ILISLNLLNL GWRTIFLVNL PLAILVVLFG IPLLKETRAQ HARKLDLGGT ALSMLTLGAL IVPLIEGREA SWPAWAWVSL LAVPALAWGF WRYERRLGSR GGAPLLDPTA LRAPGLGRAL LIALLLYSIG TFFLLFSVYL QNALHVDALS AGLVFLPFGV GFLLGPLSTP VCSRVIGAYV NPFGMSLEIV GLVGLAWLID VTPVGMPLTA VPLTVVLFVI GFGQGLALPT LMRMVTGRVA PALSGMIAGI VSSTLQVSTS LSVAIIGGIF YTVLGTRQDP AAIAHAFIVA LLSISSFLAI GAALGLSLAR APAAPPSLPA AARPTFGPAR KRP
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