| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6360 |
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| Symbol | |
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| ID | 4454732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 555965 |
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| End bp | 557401 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639698425 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_839985 |
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| Protein GI | 116686738 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCG TCTTCGCCCT GCTCGCCGCG AGCCTGCTGG CCGCGTGCTC GATCGCGCCG
CAGCCGCTCG CGCCCGTCCC GGTCGAAACC GACCGGTTCC GTCATGCCGA TCCGGCGACC
GATGCGCACG CACCGTCGCT CGCCGCGTGG CCGGCGTGGT TCGGTGACTC GCAACTCGGC
CGCCTCGTCG ACGCCGCACT CGCGCACAAC CTCGACATCC GCGCGGCGGC CGCGCGCGTC
GACCAGGCGC AGGCGCTGCT CGGCGTGCGC GAAGCCGCGC TGGCGCCGAC CGTGCGCGTC
GACCCGTCGT TCAGCCGCAC GCGGGTGTCC GGCACGGTCG ACAACGCGCT GCCGAAGCGC
ACGATGCACA ACTGGTCGGT GCCCGTCGCC GCGAGCTACG AAGTCGATCT ATGGGGCCGC
TTGCGCGGCG ATGCCGACGT CGGCGAACAG AACCTGCTGC AGGCGGCGGC CGATCGCGAT
GCGGTGCGTC TGCGGGTGGC GACCGAAGTG GCCGTCGACT ACCTGACGCT GCGCTACGTC
GACGACGATC TCGTGACGCT CGTGCGCGCG ATCGGGCTGC GGCGCACCGC GCTCGACGTG
ATCGCCGCCC GCGTGCGGGC CGGCGCGGCG AGCGATCTCG ACGGGCTGCG CGCGTCGGCC
GATCTCGATA CCGCGCATGC CGATCTCGCG GAAAGCCGCC GGCTGCGCGA GAACCTCGTC
GACGCCCTCG CGGTGCTGAC CGGCGTGTCG CCGACCGCGT TCGACGTCGA TACCGGCGCC
GTGCCCGTGC AGGTGCCGGA GGTGCCGGCC GGATTGCCGT CCGCGCTGCT CGCCCAACGC
CCGGACGTAT TCGCGGCGGC ACGGCGCGCC GATGCGGCGT CGCTCGAGCT GGGCATCGCG
CGCACCGCGT GGCTGCCGAC GCTGACGCTG ACCGCCGACG GCGGTTTCGC CACCCGCGAC
CTGCGCTCGT TTCTCGACCG CAACAGCTCG CTGTGGAGTC TCGGCGCGAA CGTCGCGCTG
ACGCTGTTCG ACGGCGGCAA GCGCGATGCC GCGGTGGCCG CCGCGCGAGC CGGCACGAAC
GTCGCCGACG CCGACTATCG CGCGACCGCG ATCGGTGCGT TGCGCGACGT GCAGGACGCG
CTCAACGACA TCGCCGCGCA AAAGGAACGG ATCGTGCGCT ACGACAGTGC GGCGCGCGCG
ACGGACGCGG CGGCGCGGCT ATCGCTGAGC CGCTACGCGC ACGGTTACGT CAGCTACCTG
GAAGTGATCG ACGCCGATCG CGACGCACTG AATGCGCGGC GCCAGCTGAT TCACAGCCGG
CAGGCGCTGG CCGTCGCGAC GGTGAGCCTC GTGCGTGCGT TGGGCGGCGG GTGGACGCCG
CCGGCGCACG CCGGCCGGGG CGGGTTGCGC GACGCGACGC AAGCCGACGC GCGATGA
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| Protein sequence | MTRVFALLAA SLLAACSIAP QPLAPVPVET DRFRHADPAT DAHAPSLAAW PAWFGDSQLG
RLVDAALAHN LDIRAAAARV DQAQALLGVR EAALAPTVRV DPSFSRTRVS GTVDNALPKR
TMHNWSVPVA ASYEVDLWGR LRGDADVGEQ NLLQAAADRD AVRLRVATEV AVDYLTLRYV
DDDLVTLVRA IGLRRTALDV IAARVRAGAA SDLDGLRASA DLDTAHADLA ESRRLRENLV
DALAVLTGVS PTAFDVDTGA VPVQVPEVPA GLPSALLAQR PDVFAAARRA DAASLELGIA
RTAWLPTLTL TADGGFATRD LRSFLDRNSS LWSLGANVAL TLFDGGKRDA AVAAARAGTN
VADADYRATA IGALRDVQDA LNDIAAQKER IVRYDSAARA TDAAARLSLS RYAHGYVSYL
EVIDADRDAL NARRQLIHSR QALAVATVSL VRALGGGWTP PAHAGRGGLR DATQADAR
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