| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6177 |
|---|
| Symbol | |
|---|
| ID | 4453906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 339397 |
|---|
| End bp | 341520 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639698237 |
|---|
| Product | fusaric acid resistance protein region |
|---|
| Protein accession | YP_839802 |
|---|
| Protein GI | 116686555 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.717344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATC CGAGCCTCCG CGACTGGCTG TTCTCGGGCA AGACATTCGC CGCGTCGATG
CTGGCGCTGT ACCTCGGCCT GTATTTCCAG TTGCCGCGCC CGTACTGGGC GATGGCGAGC
GTCTACATCG TGTCGAACCC GTTCGTCGGC GCGACGCGCT CGAAGGCGCT GTACCGCGCG
CTCGGCACCG CGCTCGGGGC GGCCGCCGCG ATCTTCTTCG TGCCGCCGTT CGTCGAGACG
CCGCTCCTGT TCAGCATCAT CGTCGCGACC TGGTGCGGCA CGCTGCTGTA CCTCGCGATC
TCCGACCGCA CCGCGCGCAG CTACGTCTTC ATGCTCGCCG GCTATACGAT GCCGCTGGTC
GCGCTGCCCA CCGTCACCGA TCCGTCCACC ATCTTCGACG TCGCGATCGC GCGCACCGAG
GAAATCGTGC TCGGCATCGT GTGCGCGAGC GTGGTCGGCA GTGCCGTGTT CCCGAACCGG
CTCGCGCCGA CGCTGATCGA GCGCACCGAC GCGTGGTTCA AGGACGCCGC GTTCTACGGC
CGCGAAACGC TGTCCGGGCA CCTGGCCGGC AAGGCGCTGT CCGCGTGCCG GCAGCGGCTC
GCCGCGACCA TCACCGGCCT AGAATTCCTG CTGAGCCAGC TGGGCTACGA CCATGCGCAT
CCGCGCGTGC TGGCGCGCGC GCAGGCGCTC GCGGGCCGGA TGCAGCTGTT CCTGCCGCTG
ATGTCGTCGC TCGCCGATCC GCTGATCGCG CTGATGCGCG ACCTGCACGT GCGCCCGCCC
GCACTCGACG CGCTGCTGGC CGACGCCGCA AAGTGGTTCG ACGCGCCGCT GCCGGCCGTG
AAGGCCGGCT CCGACGGCGC CATGGCGCAC GATCCGGTCG CGGACGACCT GCGCGAGCGC
ATCGCCGCGC TGCAGCCGCC CGACAGCGCA CTGACGAGCT GGGACGGCGC GCTGCTGTCG
AATGCGCTGT GGCGGCTGCG CCAGGTCATC GACATCTGGC AGGACTGCCG TTCGCTGCGC
GCATTGATCG CGAACGAGTC GGGCGTGTGG CAGCCGCGCT ACCGGCACTG GCGGCTCGGC
GGCACCGAAC GCTTCTTCGA TCGCGGGATG ATGCTGTTCT CGACGCTGAC CGTCGTGTTC
GCGATCGTGT TCGCGTGCTG GCTGTGGATC TCGTCCGGCT GGCACGACGG CGCGGCCGCC
GTCACGCTCG TGGCCGTGTC GTGCAGCTTC TTCGCCGCGC TCGACGAGCC CGCGCCGCTG
GTGTTCAAGT TCTTCCTGTC GACCACCGCG AGCGTCGTGT TCGCGGGCCT GTACCTGTTC
GTCGTGCTGC CGCACGTACA CGATTTCGTG ATGCTCGTGC TGATGTTCGC AGGCCCGTTC
ATCCTGATCG GCACGCTGCT GCCGCGCCCG CAGTTCAACA TGGTGACGAT GCTCGTCGCG
GTGAACACGG CCACCTTCAT CAGCATCCAG AGTGCGTACG AGGCCGATTT CTTCGTGTTC
CTGAACAGCA ACCTCGCGGG CGTCGCCGGG CTGCTGTTCG CATACGTGTG GACGCGCGCG
ACGCGACCGT TCGGCGCCGA ACTCGCGGTA CGGCGCCTGC TGCGCTCGGG CTGGGAGGAC
GTCGCGCGCT CCGCGTCGAC GCAGCCGCTC GACGATCAGC GCAACCACGC ATCGCGGATG
CTCGACCGCG TCACGCAACT GCTGCCGCGC CTCGGGGCGT CCGACGACCA CCGCCACCCG
TCGATCGAAA GCTTTCGCGA CCTGCGCATC GCGCTGAATG CGCTCGACCT GCGCCGCTCG
CGGCGCCGGC TGTCGGGCGA CGTGCCCGAC GCGATAGATC GCGTGCTGGC CGGCGTCACC
GATCACTACA CGCGCTGCGC GGCCGCGAAC GCGCGCCAGC CCGTGCCGCC CGCGCTGCTC
GCGACGATCG ACGACGCGCT GCGGCGCGTG GCCGGCCGCA ACCTGCCGGG CGCCGCGCCG
GCCGACGGCG CGGCCGCGCC CACGGTGCCA GCCACGCACC GCCGGCTGCG CGACACGCTG
CATGCGCTCG TCGGCCTGCG CCTGTCGCTG TATCCGGCTG CGGCCGCGCA AGCGCCGCAG
GCGCCGGACG GAGCGCGCGC ATGA
|
|---|
| Protein sequence | MTYPSLRDWL FSGKTFAASM LALYLGLYFQ LPRPYWAMAS VYIVSNPFVG ATRSKALYRA
LGTALGAAAA IFFVPPFVET PLLFSIIVAT WCGTLLYLAI SDRTARSYVF MLAGYTMPLV
ALPTVTDPST IFDVAIARTE EIVLGIVCAS VVGSAVFPNR LAPTLIERTD AWFKDAAFYG
RETLSGHLAG KALSACRQRL AATITGLEFL LSQLGYDHAH PRVLARAQAL AGRMQLFLPL
MSSLADPLIA LMRDLHVRPP ALDALLADAA KWFDAPLPAV KAGSDGAMAH DPVADDLRER
IAALQPPDSA LTSWDGALLS NALWRLRQVI DIWQDCRSLR ALIANESGVW QPRYRHWRLG
GTERFFDRGM MLFSTLTVVF AIVFACWLWI SSGWHDGAAA VTLVAVSCSF FAALDEPAPL
VFKFFLSTTA SVVFAGLYLF VVLPHVHDFV MLVLMFAGPF ILIGTLLPRP QFNMVTMLVA
VNTATFISIQ SAYEADFFVF LNSNLAGVAG LLFAYVWTRA TRPFGAELAV RRLLRSGWED
VARSASTQPL DDQRNHASRM LDRVTQLLPR LGASDDHRHP SIESFRDLRI ALNALDLRRS
RRRLSGDVPD AIDRVLAGVT DHYTRCAAAN ARQPVPPALL ATIDDALRRV AGRNLPGAAP
ADGAAAPTVP ATHRRLRDTL HALVGLRLSL YPAAAAQAPQ APDGARA
|
|---|
| |