Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6002 |
Symbol | |
ID | 4454748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 148989 |
End bp | 150791 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639698062 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_839627 |
Protein GI | 116686380 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGAG CGGCCGTGTT CCTCAAGGGG AGAATCCTCG TGACGAAGTA CGCATCCACC ATTCACCGCC TGATCGAATC GCTCGAGGAC GTGGCGGGCG CCATGCATCG CATGACGTTC GTCGACGACG CGGGCCACGA AGCGGGCATC ACGTACCGGC ACTTCGCGGA AGAGGTTTTT CGTCAGGCCG GCGCGCTGCG CGAGCTCGGG GTACGCGAGA ACGATCTGGT GATGCTCGCG CTGCCGGCGT CGGTCGAGCA TGCAGCCGCG ATGATGGCCT GCGTGATGAC CGGTGCACTG CCCTGCACCG TGCCCGTTCC CATGCGGCGT GCGGCGGCCG GGCGACAGGT CGCGGACGTC GCGTGCGAGC TGTACCGGCC GCGCCTGGTG GTTGCCGCGG ACGCGCAAGC CGCGGCCTGG CGCGACGATG CGTTTCCCGC GGCCGCCACG CGCGTGGTCG ATCTCGCGAC GCTGTCGAGC GCGGCGGACG CCGGCGCGCG CGCACTGATC AGTTCCAAGA GCGGCCGCGA TCCGCATCAT GTGCAGCTCA CGTCCGGTTC GACGTCGCAT CCGAAGGCCG CGGTGCTCAG CCACGAGAAC GTGATCGCGA ACGTGCTCGG CATCGGCGGA TCGGTGCGAT TCGACATCGC GGCCGGCGAC GGCACCGCGT CGTGGCTGCC GCTCTATCAC GACATGGGGC TGCTCACGCT GCTGTCAAAC CTGCATTACC GCGCGCCGCT GCTGATGATG CAGCCGAACA GCTTCATCCG GAATCCGCTC GGCTGGCTGA AGCGCATCGC GTCGGCGCGC GCGACGACGA CGTCGGTGCC GACCTTCGCG CTGCGCTACT GCGTGCGCCG CTTCAACGCC GCCGCGATGG ACGGCGTCGA TCTGTCCGCG TGCCGCAACA TCTTCATCGG CGGCGAACGC GTGGACGACG CGACGCTGCG CGATTTCGCC GCGACGTTCG CGCCGTACGG GCTGGCAGCG TCGGCGCTGC AGCCGTGCTA CGGGATGGCC GAATCGACGC TCGCGGTATC GATGCATCGT GCATGGCACG AAGGCGCGGT CGACGGCGCG CCGTACGTGA TCGCCGATAC GCTCGACCGG CGCGCGCTGA TCGAGCGCCG CGACGCGCAG CCGGCCGCCG CGAACGACGG CCAGGACACG GAGACCGAAA CGGTGCTCGC GATGGGCACG CCGATCGACG GGATGGCGTT CCGCATCCTC GACGACGGCG GCCATGCGCT CGCCAACCGC GCGGTCGGCG AAGTCGCGAT CCGCGGCACG TCGGTGATGC TCGGCTACCT GAACCCCGAC GACGGCACGA TCGCCGCGCC GCTGACGGCC GACGGCTGGT TCCGCACCGG CGACATCGGC TACGTCGCGG ACGGCCAGTT GCATATCCTC GGCCGCAAGA AGGAAGTCAT CATCATCCGC GGCAGCAACT ATTTCCCGCA CGAGATCGAG GAAGCGCTGG CGTCGCACAG CGCGCTGCGC AAGAGCACCT GCATCGCGTT CGGCCTGCCC GATCCCGAAA CCGGCACCGA GCGGCTGGTC GTCGCGATCG AGGCGCGGCC CGTCGACGCG ACGCCGCAAA CGCGCACCGA GTGCCAGCAG TTGCTCGCGT CGCGCATCGG CTTCGCCGCG CAGGATCTGT GTTTCGTCGA GCCCGGCTCG CTGCCGCGCA CGACGAGCGG CAAGCTGCAG CGCCTGAAGT GTCGCGATCT CTATGCGAAC GGCGCGCTGC CCGTGATTCC CGCGTCGGCC GCCGTCGAAG CAGTCCAGGG AGCGTTCGCA TGA
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Protein sequence | MARAAVFLKG RILVTKYAST IHRLIESLED VAGAMHRMTF VDDAGHEAGI TYRHFAEEVF RQAGALRELG VRENDLVMLA LPASVEHAAA MMACVMTGAL PCTVPVPMRR AAAGRQVADV ACELYRPRLV VAADAQAAAW RDDAFPAAAT RVVDLATLSS AADAGARALI SSKSGRDPHH VQLTSGSTSH PKAAVLSHEN VIANVLGIGG SVRFDIAAGD GTASWLPLYH DMGLLTLLSN LHYRAPLLMM QPNSFIRNPL GWLKRIASAR ATTTSVPTFA LRYCVRRFNA AAMDGVDLSA CRNIFIGGER VDDATLRDFA ATFAPYGLAA SALQPCYGMA ESTLAVSMHR AWHEGAVDGA PYVIADTLDR RALIERRDAQ PAAANDGQDT ETETVLAMGT PIDGMAFRIL DDGGHALANR AVGEVAIRGT SVMLGYLNPD DGTIAAPLTA DGWFRTGDIG YVADGQLHIL GRKKEVIIIR GSNYFPHEIE EALASHSALR KSTCIAFGLP DPETGTERLV VAIEARPVDA TPQTRTECQQ LLASRIGFAA QDLCFVEPGS LPRTTSGKLQ RLKCRDLYAN GALPVIPASA AVEAVQGAFA
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