Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5961 |
Symbol | |
ID | 4454689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 93015 |
End bp | 94292 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639698022 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_839587 |
Protein GI | 116686340 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.616492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0368269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATC CACTTGACAC GATGTTCGGC CGGCTCGTCA TCACCACGGT GGGCCTGCTG GTGCTGGTTC ATCTTACGTC GCTGCTGTTG ATCGAGCGAA CGCGCGCGAG CCTCGCCGCC TTCCATATTT CGCGCGTCGT GGAGGCTGCC GCCAGCATGG GCGGGCAGGA CAGCGGCGGC GAGCGGTCCG TGGCGGACAT CCTCGGTATT TCGTTCGTGG ACCTGAAGCA ACTGCCGGCC GCCGACGCGC AGCGCTTTCG CGGCGACACG AACGGGCCCA TCGAACGGCA ATTGCGGCAC GTGCTGCCGC CGGGCACCCA CGTGGCAATG GACGACGACG GCACGCTGCG CGTGCTCCGC GCAGGCAGCA CACATGGCAT CGTGCTGCCG CGAGCCGAGG TGCCGGTGAG CCGCTTCACC GGGGTGCTGG CGTTGACGCT GGTGTTCGCT ATCGGGGTTG CCGTCGTGCT TGCCTGGCAA TTGAATCGCC CCATTCGCGA TCTTGCCGCA GCCGCGCGCG AACATCGCAC CGGCCACCAC CTGAACATCG TGCGCAAGCG CGGGCCGCGC GAATTGCGCG AGTTGATCGG CGACTTTAAC GACATGACCG GCGAGCTGGC CGTGGCCGAG CGCGAGCGCG CCGTGATGCT GGCGAGTATC GCGCACGACC TGCGCACACC GATCACACGC ATGCAGGTGC GGGCCGACCT GCTGACCGAT CGTGGCGATC GCGAGGGTTT TCTGCGCGAT ACCGAGTCCA TGTCGCGTGT CATCACGCAG TTTCTCGATT TTGCGCGCGA GATCCCCGAA GGTTCGCCGC AGATCAGCGT GGACACGCAT TGCCGTCGCG ATTACACCGA CGCGCTGAGT CCGAGCGGCG ACGCGCACCG AGATGCGCTC GTCACGCTCG ATCTTCACGC GGGGCCCGAC TTCATGCTAC CCGCGGTCGA TATCGACCGC ATGCTCTCGA ACCTCGTCGA AAATGCGCTC ACCTACGGCG AGCCGCCCGT GGAGATCGCC ACGCGAGCGC GTGGCGAGCA CTACGAACTC GTGGTACGAG ACCACGGGCC CGGCGTATCC GAGCCTGATC TGGATCGCGT GCTGCGTCCG TTTGTCCGGC TCGATCCCGC TCGCGGCGGC ACCTCGCACA GCGGCTTGGG CCTGGCCATC GTTCACCGCC TCGTTCGCCA TCACGGCGGC ACGCTGCACA TGTCCAACGC GGCAGACGGC GGGCTTGTCA TAGTGATGAG GTTTCCGAAG CGCAGCGCCG CGCAATGA
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Protein sequence | MKNPLDTMFG RLVITTVGLL VLVHLTSLLL IERTRASLAA FHISRVVEAA ASMGGQDSGG ERSVADILGI SFVDLKQLPA ADAQRFRGDT NGPIERQLRH VLPPGTHVAM DDDGTLRVLR AGSTHGIVLP RAEVPVSRFT GVLALTLVFA IGVAVVLAWQ LNRPIRDLAA AAREHRTGHH LNIVRKRGPR ELRELIGDFN DMTGELAVAE RERAVMLASI AHDLRTPITR MQVRADLLTD RGDREGFLRD TESMSRVITQ FLDFAREIPE GSPQISVDTH CRRDYTDALS PSGDAHRDAL VTLDLHAGPD FMLPAVDIDR MLSNLVENAL TYGEPPVEIA TRARGEHYEL VVRDHGPGVS EPDLDRVLRP FVRLDPARGG TSHSGLGLAI VHRLVRHHGG TLHMSNAADG GLVIVMRFPK RSAAQ
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