Gene Bcen2424_5630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5630 
Symbol 
ID4451990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2741487 
End bp2741963 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content64% 
IMG OID639697691 
ProductAsnC family transcriptional regulator 
Protein accessionYP_839256 
Protein GI116693723 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00107308 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGACCC CTCTCGATGC GTTCGATCGC AAGCTGTTGA TGGAACTCCA GCGCGACGCG 
CAGACGCCGC AGGCCGAGCT CGGCGCGCGC GTCAACCTGT CGACCGCCGC GGTGAACCGG
CGGCTGCGGC GCCTCGCGGA AGATGGCGTG ATCGAGCGCT ACACGGCCGT CGTCGCGCCG
GACAAGGTCG ATCATCCGCT GACGATCGTC GTGAACGTCG AGGTCGAAAG CGAGCAGATC
GACCAGCTCG ATGCGATGAA GCGCACGTTC GAGCGCTGCC CGCAAATCCA GCAGTGCTAC
TACGTGACGG GGGAATGGGA TTTCGTGCTG ATCCTCGCGG TGCGCAACAT GGATCAGTAC
AACGCGCTCA CGCGCGAGCT GTTCTTCGCG AACAACAACG TGAAGCGGTT CAAGACGCTG
GTCAGCATGA GCCGCGTGAA GGTCGGGCTC GACGTGCCGG TCGATGCCGG CGAGTGA
 
Protein sequence
MTTPLDAFDR KLLMELQRDA QTPQAELGAR VNLSTAAVNR RLRRLAEDGV IERYTAVVAP 
DKVDHPLTIV VNVEVESEQI DQLDAMKRTF ERCPQIQQCY YVTGEWDFVL ILAVRNMDQY
NALTRELFFA NNNVKRFKTL VSMSRVKVGL DVPVDAGE