Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5385 |
Symbol | |
ID | 4451422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2484078 |
End bp | 2484983 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639697446 |
Product | LysR family transcriptional regulator |
Protein accession | YP_839011 |
Protein GI | 116693478 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.253203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACA GTACACTGCG CGATTCCTTT GGCGGGTTGA CGGCACTCAT CGCCGTTGCT CGCGCGAAAA GTTTTACTCG AGCTGCCGTG CAGTTGGGTG TGTCCCAATC CGCAGTCAGT CACGCAGTTC GTGCGCTGGA GGAGCGGCTC GGCGCTCGAC TGCTCGCGCG AAATTCGCGT ACCGTCACGC CGACTGAAGT AGGCGAGCGG CTCCTTCACA TCGTTGCGCC GCGCTTGAAG GAAATCGACG CGGAGATGTC CGCTCTGTCG GATCTCGGTG GCAGCCCGAG GGGCTCCATT CGCGTCACCG CACCGGACTA TCCGAGCCGG ACGATTCTCG CTCCCAAGCT GAAAGAGTTT CTGCCCAAAT ATCCTGATAT CAAGGTCGAG CTGAGTATCG ACAATCGCTT TGTCGACCTC GTGGCCGAGC AGTTCGATGC CGGAGTCCGG CTTGGCGAAG CGATTGCGCA GGATATGATC GCCGTTCAAA TCGGTCCTGA CGTTCGCTTC ACCGTCGTGG GCACGAAGCG GTACTTTGCC ACCCATGCAG TGCCTCGGAC ACCCGGTGAT CTCATACACC ATAGCTGCGT GAACTTGCGA CTGATGGCGC ATGGCGGATT ATGGGCGTGG GAGTTCGAAA AAGGCGGACG ACCGGTCAAT GTTCGCGTCG ACGGTCAGTT GGCGTGCAAC GACATTTACG AATGCCTGGC CGGTGCGGTG GCGGGGCTTG GGCTAGCGTA TGTTCCGGAA GATCTCGCCG AACCGTATAT CAAGGCGCAG CACTTGATAC CGGTCTTGAC GGACTGGTGT CCGTCTTGGG GTGGGTTCTA TCTGTACTAT CCCAGCCGGC GACAACCGTC GGGAGCGATG GCCCTTCTTG TATCCGCGTT GCGTCATGCG CATTAG
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Protein sequence | MEDSTLRDSF GGLTALIAVA RAKSFTRAAV QLGVSQSAVS HAVRALEERL GARLLARNSR TVTPTEVGER LLHIVAPRLK EIDAEMSALS DLGGSPRGSI RVTAPDYPSR TILAPKLKEF LPKYPDIKVE LSIDNRFVDL VAEQFDAGVR LGEAIAQDMI AVQIGPDVRF TVVGTKRYFA THAVPRTPGD LIHHSCVNLR LMAHGGLWAW EFEKGGRPVN VRVDGQLACN DIYECLAGAV AGLGLAYVPE DLAEPYIKAQ HLIPVLTDWC PSWGGFYLYY PSRRQPSGAM ALLVSALRHA H
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