| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5156 |
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| Symbol | |
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| ID | 4452759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2204670 |
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| End bp | 2205971 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639697212 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_838782 |
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| Protein GI | 116693249 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.426256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT CCGCTTCCCG TCCCCTGCTC GGCTGCATCG CCGACGATTT CACCGGCGCG
ACCGACCTCG CGAACATGCT CGTCAAGAGC GGCATGCGCA CCGTGCAGAC GATCGGCGTG
CCCGCCGACG GCGCCGCTGC CGACACGATC GTCGACGCCG ACGCGATCGT CGTCGCGCTG
AAGTCGCGCA CGATCCCCGC CGCCGACGCC GTCGCGCAAT CGCTCGCCGC GTACGCATGG
TTGCGCGCGC AAGGGTGCCG CCAGTTCTTC TTCAAGTACT GCTCGACGTT CGACTCGACC
GACGCGGGCA ACATCGGGCC GGTGGCCGAC GCGCTGCTCG ATGCGGCCGG CGGCGACTTC
ACGATCGCGT GCCCGGCGTT TCCCGAGAAC GGCCGCACGA TCTACCGCGG CCACCTGTTC
GTCGGCGACG TGCTGCTGAA CGAATCGGGG ATGGAAAATC ATCCGCTCAC GCCGATGAAG
GACGCGAACC TCATGCGCGT GCTGCAACGG CAGACGAAGT CGCCGGTCGG CCTGATCCGC
TACGACACGA TCGCGCTCGG CGCGGCGGCC GTGCGCGCGC GGATCGACCA GCTGCGCGCG
GAAGGCGCCC GTTTCGCAAT CGCCGACGCG CTGTCGGACC GCGATCTGTA CGTGCTCGGC
GAAGCGTGCG CGGGCCTGCC GCTCGTCACC GGCGGCTCGG GCATCGCGCT CGGCCTGCCG
GCGAATTTCC GCCGCGCGGA GCAGTTGCCC GAGCGCGACA ACGCGGCGTC GCTGCCGCGC
ATCGACGGCC TGTCGGCCGT GCTCGCCGGC AGCGCGTCGA AAGCCACCAA CGCGCAGGTC
GCCGCATGGC GCGCGACGCG TCCGAGTTTC CGTATCGATC CGCTCGCGGC CTCGCGCGGC
GAGCCCGTCG TCGATCAGGC GCTCGCGTTT GCGCGCTCGC ACCTGCCCCA GCCCGTCCTG
ATCTATGCGA CCGCCACGCC CGACGAAGTG AAGGCCGTGC AGCAGGCGCT CGGCGTCGAC
GCGGCCGGCC ATCTCGTCGA AAGCACGCTC GCGGCGATCG CCCGCGGGCT GCGCGAACTC
GGCGTGCGCA AGTTCGTCGT CGCCGGCGGC GAGACGTCCG GCGCAGTCGT GCAGGCGCTC
GACGTGAAGT CGCTGCAGAT CGGCGCGCAG ATCGATCCGG GCGTGCCGGC CACGGCCACC
ATCGACGCGC AGCCGCTCGG CCTCGCGCTG AAATCCGGCA ACTTCGGCAC CACGGACTTT
TTCGACAAGG CGCTGCGCGC GCTGGACGGA GCCGCACGAT GA
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| Protein sequence | MTASASRPLL GCIADDFTGA TDLANMLVKS GMRTVQTIGV PADGAAADTI VDADAIVVAL
KSRTIPAADA VAQSLAAYAW LRAQGCRQFF FKYCSTFDST DAGNIGPVAD ALLDAAGGDF
TIACPAFPEN GRTIYRGHLF VGDVLLNESG MENHPLTPMK DANLMRVLQR QTKSPVGLIR
YDTIALGAAA VRARIDQLRA EGARFAIADA LSDRDLYVLG EACAGLPLVT GGSGIALGLP
ANFRRAEQLP ERDNAASLPR IDGLSAVLAG SASKATNAQV AAWRATRPSF RIDPLAASRG
EPVVDQALAF ARSHLPQPVL IYATATPDEV KAVQQALGVD AAGHLVESTL AAIARGLREL
GVRKFVVAGG ETSGAVVQAL DVKSLQIGAQ IDPGVPATAT IDAQPLGLAL KSGNFGTTDF
FDKALRALDG AAR
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