Gene Bcen2424_5143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5143 
Symbol 
ID4451167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2191208 
End bp2192161 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content70% 
IMG OID639697199 
ProductABC transporter related 
Protein accessionYP_838769 
Protein GI116693236 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.310364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCGAACGGGT CGGCAAACGC TTCGGCGACG CGCTCGCCGT CGACGACGTA 
TCGCTGACGG TGCAGCGCGG CACGATCACC GCGCTCGTCG GCGCATCGGG CAGCGGCAAG
TCGACACTCC TGCGCATGAT CAACCGGCTG ATCGCGCCGA CCAGCGGCAC GATCCGCATC
GACGGCGTCG ATACGGCGAC CGTCGCGCCC GAGCAATTGC GGCGCGGTAT CGGCTACGCG
ATCCAGGGGC ATGGGCTGTT TCCGCACTGG AGCGTCGCGC GCAACATCGC GACCGTGCCG
CGCCTGCTCG GCTGGCCGGC CGAGCGCATC GACGCGCGCG TGAACGAACT GCTCGACCTG
TTCCATCTCG CGCCGGCCGA GTTCGCGGGC AAGCTGCCGC ACGAACTGTC GGGCGGCCAG
CAGCAGCGTG TCGGCGTGGC GCGCGCACTC GCCGCCGAGC CCGCGATCCT GCTGATGGAC
GAACCGTTCG GCGCGCTCGA TCCGATCATC CGCAACAAGG CGCAGGACGA CCTGTTCGCG
CTGCAGCGCC GCCTCGGCAT CACGGTCGTG ATCGTCACGC ACGATATCGA GGAAGCGCTG
AAGCTCGGCG ACACGATCGC GGTGATGGAC GGCGGCCGGC TGCTGCAGGT CGCATCGCCG
GCCGAGATTC TCGGCGGCCC GGCACCGGGT GTGGTCGAAC AGCTCGTCGC GGGCGTCGAC
CGGCCGCTGC GCCTGCTCGC GCTGACGCCG ATCGACACCG TGGCCGAAGC CGGCCACGTC
GATGGCGAAC CGATCGCCGC GACGCGCACG CTGCGCGATG CGGTGTCCGA ATTGTTGTGG
CGCGGTGTCG ATGCGCTGCC CGTGGACGAT ACGGCCAACG GCACCCCCAA CGCACGCGGC
CCCCGCCGCA TCACGCTCGA CGCGATCCGC GCACACGCGA GGAAGCCTGC ATGA
 
Protein sequence
MIEIERVGKR FGDALAVDDV SLTVQRGTIT ALVGASGSGK STLLRMINRL IAPTSGTIRI 
DGVDTATVAP EQLRRGIGYA IQGHGLFPHW SVARNIATVP RLLGWPAERI DARVNELLDL
FHLAPAEFAG KLPHELSGGQ QQRVGVARAL AAEPAILLMD EPFGALDPII RNKAQDDLFA
LQRRLGITVV IVTHDIEEAL KLGDTIAVMD GGRLLQVASP AEILGGPAPG VVEQLVAGVD
RPLRLLALTP IDTVAEAGHV DGEPIAATRT LRDAVSELLW RGVDALPVDD TANGTPNARG
PRRITLDAIR AHARKPA