| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3793 |
|---|
| Symbol | |
|---|
| ID | 4452285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 654408 |
|---|
| End bp | 655649 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639695851 |
|---|
| Product | Cl- channel, voltage-gated family protein |
|---|
| Protein accession | YP_837423 |
|---|
| Protein GI | 116691890 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.258404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.231279 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTCA CCACTTCTGC CGATCTTTTC GCGACCGTGC GCTACGTGTG CCGCTGGCTC
GCGCTTTCAG CCTTGCTCGG CGCGCTCGCC GGCACGGCTT CCGCGCTGTT CCTGATCGCG
CTGGACTGGG CGACCGGCAC GCGGGTCGCG CATCCGTGGC TGCTGTGGGG GCTGCCGGCC
GCCGGTTTCG CCACCGGCTG GGTCTACCAT CGGTTCGGCC AGTCGGTCGC GCGCGGCAAC
AACCTGCTGA TCGACGAGAT TCACGACCCG AAGGCACTCG TGCCGAAGCG GATGGCGCCG
CTCGTGCTCG TCGCGACCGT CGTCACGCAC CTGTTCGGCG GCTCGGCCGG CCGCGAGGGC
ACGGCCGTGC AGATGGGCGG CGCGCTCGCC GATCGCATCA CGCACGTGCT CCGGCTCGAT
CGCGAGCATC GCCGCGTGCT GTTGATGGGC GGCATCGCGG CCGGCTTCGC GTCGGTGTTC
GGCACGCCGC TCGCGGGTGC CGTGTTCGGG CTCGAGGTGC TCGCGATCGG ACGCCTGCGG
TACGACGCGC TGCTGACCTG CGTTGCATCG GCGATCGTCG CGGACGTCGT GTGCCGCGCG
TGGGGCGTTC ATCACACGGC CTATGCGATT CCGTTCGTGC CGGCCGTATC GGCGACGGGG
CTCGCCGTGA CGGTCGTTGC CGGCATCGCG TTCGGCGTGG TCGGGCGGTT GTTCGCGTTC
GCGACGCATG CGCTGACCGC GTGGTTTCGC CGCGTGATCC GCCATGCGCC GCTGCAGCCG
GTGCTCGGCG GCCTGCTGGT CGCGGTGGCC GCGACCGTGC TGAACGTGCC GCAGTACCTC
GGCCTCGGCA TCCCGACGAT CGAGGCCGCG TTTCACGGCC CGCTGCCGCT TTACGATTTC
GCGGGCAAGT TCGCGTTCAC CGTCGTCACG CTCGCGTCGG GGTTCAAGGG CGGCGAAGTG
ACGCCGCTGT TCTACATCGG CGCGACGCTC GGCAATGCAC TGGGCCAGGT GCTCGCGCTG
CCGGTGCCCG TGCTCGCGGG GCTCGGCTTC GTCGCGGTGT TCGCGGGCGC GGCGAACACG
CCGATCGCGT CGACGATCAT GGCGATCGAA CTGTTCGGCG CGGATATCGG CGTGTATGCG
ATCGTCGCGT GCGTCGTCGC GTATCTGTTT TCCGGGCACG CGGGGATTTA TCGCGCGCAG
CGCGTGGCGG TGGGGAAGGG GGCGCAGGGA GAGGCGGAGT GA
|
|---|
| Protein sequence | MFFTTSADLF ATVRYVCRWL ALSALLGALA GTASALFLIA LDWATGTRVA HPWLLWGLPA
AGFATGWVYH RFGQSVARGN NLLIDEIHDP KALVPKRMAP LVLVATVVTH LFGGSAGREG
TAVQMGGALA DRITHVLRLD REHRRVLLMG GIAAGFASVF GTPLAGAVFG LEVLAIGRLR
YDALLTCVAS AIVADVVCRA WGVHHTAYAI PFVPAVSATG LAVTVVAGIA FGVVGRLFAF
ATHALTAWFR RVIRHAPLQP VLGGLLVAVA ATVLNVPQYL GLGIPTIEAA FHGPLPLYDF
AGKFAFTVVT LASGFKGGEV TPLFYIGATL GNALGQVLAL PVPVLAGLGF VAVFAGAANT
PIASTIMAIE LFGADIGVYA IVACVVAYLF SGHAGIYRAQ RVAVGKGAQG EAE
|
|---|
| |