| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3533 |
|---|
| Symbol | |
|---|
| ID | 4452205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 371854 |
|---|
| End bp | 372654 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 639695592 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_837165 |
|---|
| Protein GI | 116691632 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0725055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGC TGACGATCGA ATACGGCGTG CCGCCCGCGC GCCGGCATGC GGCACGTGCG
GCGCCGCGCA CGGTGGCGGC GGTTGCGCGT CCGCCGTCGC TGCCGCCGTC CGCGCAGGTC
GACGCACGGG CCGCACCGGC GAACGGATGG CGTGGCGCGG CGGCGATTGC GCTGGCGATC
GCGGCGCTGC ATGCGGGCGT CGCGCTGCTG GCCGCGCGCG TGCCTGCCGC ACCGCCCGTG
CAGCCGCCGC GGCCGTTGCC GATGACGGTC GAGCTGACGC GGCCGCCCGA ACCGCTGCCG
CAGGCCGCGC ACCCGCCGCC GCCGGTCGTG TCGCCGAAGC CGTTGAAGCA GGCGCCGACC
CCGCCGAAGC CGCGCGCGGC CGTACCGCGT CCGGCGCCGG CTGCCACGCC GCAGGCGACG
CGCGAAGCCG CACCTGCACC CGCGCCGGCG ACGCCGGCCG TCGCCGCGCC CGCTGCCCCG
GTTCAGGCGC CCGCGCCCGC ACCCGCCGTA CCCGTGCGCG AAACCGCGCC GATCGGCGAC
GCGGCGTACC TGCGCAACCC GGCGCCCGAC TATCCGGCGT TCGCGCAGGA CCAGGGCTGG
GAAGGGCGCG TCGTGCTGCG CGTGCACGTG CTCGCGAGTG GCACGCCCGA TTCGGTCGAG
GTCCGCACGA GCAGCGGCCG CCGCCTGCTC GACAGCGCGG CGGTGGCTGC CGTGAAGCGC
TGGACCTTCG TCCCCGCGAA GCGCGGCGAC GAAGCGGTCG ACGGCTGGGT GAACGTGCCG
ATCGATTTCA AGCTGGGCTG A
|
|---|
| Protein sequence | MTGLTIEYGV PPARRHAARA APRTVAAVAR PPSLPPSAQV DARAAPANGW RGAAAIALAI
AALHAGVALL AARVPAAPPV QPPRPLPMTV ELTRPPEPLP QAAHPPPPVV SPKPLKQAPT
PPKPRAAVPR PAPAATPQAT REAAPAPAPA TPAVAAPAAP VQAPAPAPAV PVRETAPIGD
AAYLRNPAPD YPAFAQDQGW EGRVVLRVHV LASGTPDSVE VRTSSGRRLL DSAAVAAVKR
WTFVPAKRGD EAVDGWVNVP IDFKLG
|
|---|
| |