Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3400 |
Symbol | |
ID | 4451195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 228299 |
End bp | 229591 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639695459 |
Product | outer membrane efflux protein |
Protein accession | YP_837032 |
Protein GI | 116691499 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTCG TTTTCCGCAC GCTGCGCATG CCGCGTGCAG GTCGGCGCGC GCCCGTACCG TGGGCCGCGC TGCTGGTGGC GGGCGCCGTT CACGCGCAGC CGTCGTCGCT GACGCTGGAC GCCGCGCTGC AGTCCGCCAC CGATCGTTCC GCGTCGATGC AGGCCGCGCA GGCTTCCGTG CTCGCGCGTT CCGAAGCGGC CGTCAAGGCC GGCCAGTTGC CGGACCCGAT GCTCAAGGCC GGCATCGACA ACCTGCCGGT CAACGGCGGG CAGCGCTTCA CCGTCGGTCA GGACTTCATG ACGATGCGCC GCATCGGCAT CGAGCAGGAA TGGGTGTCCG GCGACAAGCG GCGGCTGCGT ACCGCGCTGG CCGACGAACA GGTCGGCCGC GAGCGCGCCG GCTATCTCGT GCAACTCGCG GCCGTGCGCC GGCAGACCGC GACGGCGTGG CTCGATGCCG TCTATGCGAA GCAGGCGCTC GCGCTTCAGC AGGCGCTGCT CGGTCACATG AACCATGAAC TCGACGCGAC GCAGGCGTCG TATCGCGGCG CGAAGGCGAG CGCGGGCGAC GTCGTGCAGG CCCGCGCGAT GCTCGCGCAG ACGCAGGACC AGGTGCTCAA GGCACAGCAG GCGTATCGCA CCGCGCTCAT CGCGCTGGCC CGCTGGACGG CGGTGCCCGT GACGGACGTG GCCGGTACGC CGCCCGCGCC CGAATCCTTC GTATCGTCGT TGCCGCCGGA CGAACTGCGC CTGTCGCAGC CGGCGCTCGT CGCCGCCGCG GACGATATCG CAGTGGCCGA AGCCGACGCC GCGGTCGCGA ACAGCGAGCG CAGCCCCAAC TGGACGTGGG AAATCGCGTA CCAGCAGCGC GGCGGCGCGT ATTCGAACAT GGTGTCGGTC GGCGTCTCGA TCCCGCTGCC GCTCAATCGC AAGAATCGAC AGAATCGCGA CGTCGCCGAA AAGGCGGCGC TCGCGACGAA GGCGCGCCTG ATGTACGAGG ACACGCTGCG CCAGGTACAG GCCGACATCC GCACGCAATC GGACACGCTG GCGAGCGGCC GCGAACGCAT CGCGAACCTC GGCGCCGCGC TATTGCCGGC CGCCGACCAG CGCGTGCAAC TCGCGACGGC GGCGTACCGG GCCGGCACGG GGTCGCTCGC CGACACGTTC GCCGCGCGGC GTGCGCAACT CGAAGCGCAA TTACAGGTGC TCGACCTCAG GCGCGACGTG TCGCAGACCT GGGCACAGCT CGAATATCAG GTCGTGCCGT CGGCGATGGC CGCCGCGCAG TGA
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Protein sequence | MSFVFRTLRM PRAGRRAPVP WAALLVAGAV HAQPSSLTLD AALQSATDRS ASMQAAQASV LARSEAAVKA GQLPDPMLKA GIDNLPVNGG QRFTVGQDFM TMRRIGIEQE WVSGDKRRLR TALADEQVGR ERAGYLVQLA AVRRQTATAW LDAVYAKQAL ALQQALLGHM NHELDATQAS YRGAKASAGD VVQARAMLAQ TQDQVLKAQQ AYRTALIALA RWTAVPVTDV AGTPPAPESF VSSLPPDELR LSQPALVAAA DDIAVAEADA AVANSERSPN WTWEIAYQQR GGAYSNMVSV GVSIPLPLNR KNRQNRDVAE KAALATKARL MYEDTLRQVQ ADIRTQSDTL ASGRERIANL GAALLPAADQ RVQLATAAYR AGTGSLADTF AARRAQLEAQ LQVLDLRRDV SQTWAQLEYQ VVPSAMAAAQ
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