| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3277 |
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| Symbol | |
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| ID | 4453738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 117248 |
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| End bp | 118624 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639695341 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_836914 |
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| Protein GI | 116691381 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.113275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA AAAGCAGCAC GCGCCTCGTC CTAAGGCTCT CCACCTTGGC CGCGCTCGCC
GTGCAAGCGT CCGCGCAAGC GGCCACCTGC ACGCCGCAGT GGAGCAGTTC GGCCAGCACC
AACACCACGA ATCTGCAGAA CGCCATCCAA CAGTGCGCTG CCAGCGGCAC CAGCAGCAGT
CCGGGCCTGG TCGACCTGGC CAGCAACAAC GGCATCTCGA CGGCGGTCAT CACCAGCGTG
AATCTCGCCA ACAATATCGT GCTGAAGTTG GAGAAGGGCT TCACGCTGAA GGGCTCGCCC
GCGCAGCCCT CGAGCGGCGC GATGCTGACC GGCAGCAATC TGAGCAACCT GACCATTACC
GGCACCGGCG CGATCGACGG CGACGGACAG GACTACTGGC CTGCCGCAGT CGGGCAGAAC
AATACGGCCC GGCCCAAACT GATCGCCATC ACCGGCTCAA ACCTGCAGAT TGGCTCGAAC
TTCACCGATG CCGGCAAATC GCAGTCGATC GTGGCCTTCC CGAGTTCGTC CAATGCTACC
GGCAGCGCAC TGATCATCCG CAACTCGCCG AAGGAGCAAC TGGTGATTGA ATCGGGCTCG
AAGAACGTCA CGATCGACGG CGTGTGGATC TACGCGAATC CGAACCGCAA TGCCAGCGGT
GACGATCTCG CGCCGAACAC CGACGCGATC GACATCATCG GCACCCAGAC GGCGACCATC
AAGAACTGTC TGCTCGACAC CGGCGACGAC GATATCGCCA TCAAGTCAAA CGCGGGCGGG
GCGGCCACCT CGAGCGTCAA CGTCAGCCAT TGCGTGGTGG GCGGTGGTCA TGGCATCTCG
ATCGGCGGCC AGGAGGCGGC CGGCACCACG CTCGCCAAGC CCGGCGTCTC GCAGGTGACG
GTCGACACGA TGCAGTTCAG CGGCACCGAC TACGGCTACC GGATCAAGAC CGACCAGACC
GCCAAGGACA GCGGTGCCAC CACCGGCGTG ACCTACCGGA ACACCTGCAT GCGCAACGTC
CAGCAGCCCT TCCTGTTCAC CTACGCCTAC GCCTCGGGCA CCGGCGGCGC CCTGCCGATC
ATCGCCAACG TCACCATCGA CAATGTGATC GCCACCGCCA CCAAGCAGCA AGGCGCCATA
ATCGGGCTCT CGAACAGCCT GATGGGCGTG CCAAAATCGG GCGACACGGG AATCAGCATC
ACCAATAGCC AGATCAGTGG CGGTAAGGCC TTCTCCGTGA CCGACGGCGA ATTGCAACTG
GGCAGCCACA GCAGCGCGAC GACCTCGACC GGTTCGAACG GACAAGTAGT GGGGATTCCG
GATACCGGCG CGACGCTGTC CTGCCCGAGC AGCATCACGA TCCCTGCGCA GATTTGA
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| Protein sequence | MKGKSSTRLV LRLSTLAALA VQASAQAATC TPQWSSSAST NTTNLQNAIQ QCAASGTSSS
PGLVDLASNN GISTAVITSV NLANNIVLKL EKGFTLKGSP AQPSSGAMLT GSNLSNLTIT
GTGAIDGDGQ DYWPAAVGQN NTARPKLIAI TGSNLQIGSN FTDAGKSQSI VAFPSSSNAT
GSALIIRNSP KEQLVIESGS KNVTIDGVWI YANPNRNASG DDLAPNTDAI DIIGTQTATI
KNCLLDTGDD DIAIKSNAGG AATSSVNVSH CVVGGGHGIS IGGQEAAGTT LAKPGVSQVT
VDTMQFSGTD YGYRIKTDQT AKDSGATTGV TYRNTCMRNV QQPFLFTYAY ASGTGGALPI
IANVTIDNVI ATATKQQGAI IGLSNSLMGV PKSGDTGISI TNSQISGGKA FSVTDGELQL
GSHSSATTST GSNGQVVGIP DTGATLSCPS SITIPAQI
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