| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1521 |
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| Symbol | |
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| ID | 4448799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1681948 |
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| End bp | 1683279 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639693561 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_835166 |
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| Protein GI | 116689543 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00384422 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AACTGATTGG TTTGGCTATT GCATTGAGCG CGCTGGCGAT GCCGCCGCTG
TCGGACGCGG CCGACACGAG CGGCACGATC AGCCTTGCGA TCGGCGCGCA GCGGCAGATT
GCGACGGGGC GGGCGCTGCA GCGGGTCGCG GTGGGTGACC CTTCGGTGGC CGACGTGCTC
GTCGTGAAGG GCGGGCGTGG CGGCGTGCTG CTGGTGGCGA AGAACGCCGG CGCGACGAAC
GTGATGATCT GGGAGCGCGG CCGCGACGAG CCGACCGTCT ATAACGTGAA CGTCACGAGC
GGTGCGGCGC GTGCACTGCT CGACGGAACG TCGCCGAGCG TGAACACGTA TGGCGGCACG
ACGGTGATCG GCGGTGCGGC CGGAACGCTC GACGGGCATC AGCGGGCGGT CCATGCGGCG
AAGACGGTCG GCGGCAAGGA CGGGACGACG CTCGATGCGT CGACGATTTC CGGCAAGAAC
GTCGTGCAGG TCGATGTGCG GGTCGTCGAA TTCAGCCGTT CGGTGCTGAA GCAGGCGGGC
CTGAACTTCT TCAAGCAGAG CAACGGCTTT GCGTTCGGCG CCTTCGCGCC GACGGGGCTC
ACCTCGATTA CCGGTACGCC GGGCGGCTCG CTCACCTACA ACACGAGCGT ACCGATTTCG
TCGGCGTTCA ACCTCGTCGT CAATTCGGTG TCGCGCGGAT TGTTCGCTGA CCTGTCGATT
CTCGAGGCGA ACAACCTGGC GCGCGTGCTC GCACAGCCGA CGCTCGTCGC GTTGTCCGGC
CAGAGCGCGA ACTTCCTCGC GGGCGGCGAA ATCCCGGTGC CGGTGCCGCA ATCGCTCGGC
ACGATCTCGA TCGAATGGAA GCCCTACGGC GTCGGGCTCA CGGTCACGCC GACCGTGCTG
AGTCCGCGGC GGATCGCGCT GAAGGTTGCG CCCGAGTCGA GCCAGCTCGA CTTCGTGCAT
TCGATCACGA TCAACAGCGT GCAGGTGCCC GCGCTGACGA CGCGGCGCGC GGACACGACA
GTCGAGCTCG GCGACGGCGA AAGCTTCGTG ATCGGCGGCC TGATCGACCG CGAAACCACG
TCCAACGTCA ACAAGGTGCC GTTCCTGGGC GATCTGCCCA TCATCGGCGC GTTTTTCAAG
AATCTGAGCT ACCAGCAGAA CGACAAGGAG CTCGTGATCA TCGTGACGCC GCATCTCGTT
GCGCCGATCG CGCAGGGCGC GCCGCTGCCG GCGACGCCGG GCGAGCTGTC CGAGCAGCGC
GACGGTCCGG TGTGGCGTTC GTACCTGGGC GGCATGGCAT CGCCGGACGC AGGGCCGGGG
TTCTCGAAAT GA
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| Protein sequence | MKKKLIGLAI ALSALAMPPL SDAADTSGTI SLAIGAQRQI ATGRALQRVA VGDPSVADVL
VVKGGRGGVL LVAKNAGATN VMIWERGRDE PTVYNVNVTS GAARALLDGT SPSVNTYGGT
TVIGGAAGTL DGHQRAVHAA KTVGGKDGTT LDASTISGKN VVQVDVRVVE FSRSVLKQAG
LNFFKQSNGF AFGAFAPTGL TSITGTPGGS LTYNTSVPIS SAFNLVVNSV SRGLFADLSI
LEANNLARVL AQPTLVALSG QSANFLAGGE IPVPVPQSLG TISIEWKPYG VGLTVTPTVL
SPRRIALKVA PESSQLDFVH SITINSVQVP ALTTRRADTT VELGDGESFV IGGLIDRETT
SNVNKVPFLG DLPIIGAFFK NLSYQQNDKE LVIIVTPHLV APIAQGAPLP ATPGELSEQR
DGPVWRSYLG GMASPDAGPG FSK
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