| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0209 |
|---|
| Symbol | |
|---|
| ID | 4451002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 232517 |
|---|
| End bp | 233656 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639692217 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_833856 |
|---|
| Protein GI | 116688233 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTT CCATCACCAG CAAGACCGCT CGCGACAAAC TGCCCCCGCG CCGCGAACCC
TACTTCGCCC GCGTCCAATC CGGTCTTTAC GTCGGCTTCC GCAAGCTCGC CGAAGGCGAT
GGCACATGGA TTGCCCGCAG ACGTAACGAA GCAGGCAAGC AGGAATATAA GGCGCTTGGT
ACGCTCCCGG CCTTCGACGA TGCAGTGAAA GCCACGCTCG AATGGTCTAA GGCCGTGGAC
GCCGGCGTGT CCACCAAGGC CACGACCGTC ACGAACGCCT GCGAACAGTA CGTCAAGCAT
CTGGGGCTAC ATAAAGGCTC CTCCAGCAAA TTGGATGCCG AAGGCCGTTT CAAGCGACTG
GTCTACGACG ACAAGATCGG TCGTATCGAT CTGTCAAAGC TGCGGACGTC GCACGTTAAG
GACTGGCTGG CCGAGCAGAT CAGCGAGATC GAGGAGTCCG CGGAGGACGA AGACGATCTC
CGGCGCGCCA AGGACTCGGC GAACCGGAAC CTTGCGTCGT TGAAAGCTGC CCTGAACCTA
GCGCTGCATG ATCGCCTCGT CGCGACCGAT GCTGGATGGA AAACAGTTAC AAAGTTCAAG
GATGTCGGGC GTCGCAGACA ATCGTTTCTT CCGGCAGAAC AGCGAAGCGC ACTGATAGAT
GCCTGTGCCG AAGACATCCG GCAACTGGTC AAAGCCATGC TGTTCACCGC GGCTCGCCCA
GGCGAACTTG CACGCGCCTG CGTCAAACAT TTCGATCGGC AGCAAGGCAC ACTCGTCCTC
GACGGGAAGA CTGGGCACCG TGTCGTCTCG CTGGCGTCGG CGGCGATCCG CTTCTTCGAC
GAGCAGACCA AAGGCAAGAT CGCCAACGCA CCCATATTTT CCACCGAGTA CGGCCAGTCC
TGGAACAAGG ACTCGTGGAA GAAACCGTTC AAGGATGCGG TCAAAACGGC CAAGCTTCCT
GATTCCGTTG TGATGTACTC GCTTCGCCAC ACGGCCATCA GCGAAATGAT CGCAAGTGGC
ATCGACAGCT TCGAGGTGGC CCGGATGGCC GGAACGTCGA CCGAAATGAT CGACAAGCAT
TACGGGCATT TGAGGCATGA CCGTATGCGA GCGAAGCTCG ATGCAATCGC TATCATCTAG
|
|---|
| Protein sequence | MAASITSKTA RDKLPPRREP YFARVQSGLY VGFRKLAEGD GTWIARRRNE AGKQEYKALG
TLPAFDDAVK ATLEWSKAVD AGVSTKATTV TNACEQYVKH LGLHKGSSSK LDAEGRFKRL
VYDDKIGRID LSKLRTSHVK DWLAEQISEI EESAEDEDDL RRAKDSANRN LASLKAALNL
ALHDRLVATD AGWKTVTKFK DVGRRRQSFL PAEQRSALID ACAEDIRQLV KAMLFTAARP
GELARACVKH FDRQQGTLVL DGKTGHRVVS LASAAIRFFD EQTKGKIANA PIFSTEYGQS
WNKDSWKKPF KDAVKTAKLP DSVVMYSLRH TAISEMIASG IDSFEVARMA GTSTEMIDKH
YGHLRHDRMR AKLDAIAII
|
|---|
| |