| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4064 |
|---|
| Symbol | |
|---|
| ID | 7861162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4496516 |
|---|
| End bp | 4497088 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643868167 |
|---|
| Product | regulatory protein TetR |
|---|
| Protein accession | YP_002884067 |
|---|
| Protein GI | 229822541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.3318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACG TCGAAGCCGA GCTCGTCCCG CGGCGAGCCA TGCGCGCCGA TGCGCGGCGC
AACTACGACG CGCTGCTCGT CGCCGCGCGA GACGCGTTCG CCACGGGCGG CGTCCAGGCG
TCGCTCGAGG ACATCGCACG CCGTGCGGGA GTCGGCGTCG GCACGCTCTA CCGCCACTTC
CCGACGCGGC AGGATCTCCT GCGCAGCGTC TACCTCGACG AGGTCACGGC GCTCGTGCGG
TTCGCCGAGG AGCAGCCGGG CGCCGACGCC TGGGACGCCC TCGTCGCGTG GCTGCGGCGG
TTCGTGGAGT ACGTCGGGAC GAAGCGGGCG CTCGCGGAGG GTCTGCGCTT CGACGAGCCG
GTCATGCGTT CCGCCCGCGA CCGCATGATG GCGGCCGGTG CGCCGCTGCT CGCCCGCGCC
CAGGAGGCCG GCGTCGCCCG CGACGAGCTC GACATCGACG ACGTCGTCAG CCTGGTGCTC
GGGATCGTGA TGATGAACGC CGACGACCGC GAGCGCCTCG AGCGGCTCCT GCGCGTCGGG
CTCGACGGGC TGCGGGCGCC TGCCGGGAGG TAA
|
|---|
| Protein sequence | MSDVEAELVP RRAMRADARR NYDALLVAAR DAFATGGVQA SLEDIARRAG VGVGTLYRHF
PTRQDLLRSV YLDEVTALVR FAEEQPGADA WDALVAWLRR FVEYVGTKRA LAEGLRFDEP
VMRSARDRMM AAGAPLLARA QEAGVARDEL DIDDVVSLVL GIVMMNADDR ERLERLLRVG
LDGLRAPAGR
|
|---|
| |