Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3996 |
Symbol | |
ID | 7861094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4420963 |
End bp | 4422381 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643868099 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002883999 |
Protein GI | 229822473 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0734403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.950841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGA GCATCACGAT CCACCGGCGT ACGATCCTGC AGGCCGGTAT CGCTACCGCG GCGGTGTTCC CGCTGCTTGC CGCCTGTGCC ACCGGCGGTG GCAGCGGCGA CGACGACGAG GAGACCACCG AACCCACCGG TGACGTCGAT CCCGACAACC CGTTCAACGT CCCTGCCGAC GTCGAGGTCG ACACCGTCAT CTTCGACGGC GGTTACGGCA TCGACTACGT CGAGTTCGCC GCCGACCTGT TCGAGCAGCT CCACGAGGGC TCGTCGGTCG CCGTGGCGCC ATCCACCCAG ATCGCCACGG AGATGCAGCC GCGGTTCGTC GGCGGCAACC CGCCGGACCT CATCGACAAC TCCGGCGCCC AGGCGATGGG CTTCAACACG ATCCTCGAGC AGCTCGAGGA CCTGAACGAC GTGTTCGACG CCCCCAACCT CGAGGGTGAG ATCATCCGGG ACACGGTGTA CGCCGGCTCG GAGCTTCCCG GCACGTTCAA CGACAAGTTC GTGGCCATCA ACTACGTGCT CACCGTGTAC GGCGTCTGGT ACTCCGGCTC GCTGTTCGAC GAGAACGGCT GGACGCCGCC CACCACGTGG GACGAGGCGA AGGAGCTCGG CGCAGCTGCG GCCGAGCAGG ACCTGAAGCT GTTCGTCTGG GGTCAGGAGG CGGCGACGTA CTACCAGACC CTCGCCGTCG ACTCCGCGAT CATCGAGGCC GGCGACGAGC TTCGCCTCGC GCTCGAGAAC CTGCAGCCCG ACTGCTGGTC GCACGAGGCC CTGCAGGACG TGTTCGCCGC GCTCAAGGAG ATCGTCGACC TCGGGTACTT CGTCCCCGGC GGCTCCGGCA CGCAGTTCAC TGCCGCTCAG GCGCGGTGGA GCAACGACCG GCAGGCGTTG CTGTACCCGT CCGGGTCCTG GATCGAGAAC GAGATGAACA AGGAGAACCA GGTCGCCGAG GGCTTCGAGA TGAAGGGTGT CGCCACGTGG CCGCTGTCGA GCAGCTCGGC CATGCCAGCC GGGACGCTGC ACTCGACGGC CGGCGAACCG TTCGTCGTGC CGACCGACGC GAACAGCGTC GAGTCCGGCA AGGAGATGAT CCGGATCATG CTGTCGCGTG AGGCGGCGGA GAACTTCGCG AGGTCGAAGC TCGCTCCGAC GATCGTCATG GACACGGTGC CGGAGGACGG CTTCGGGTCG ACGGCGCTCG TCTCCCAGCA GGAGATGCTC GCTGCCGCCG GCGAGAACAA GTTCACGTGG AACTTCGTCG GCACGTACGG CATGAACCAG GAGCAGCTCG TCATCTGGAA CTCGTTCCTC GACGGCGCGA AGTCTGTGGA CGACCTCACG TCCGAGCTGC AGGCCATCAC GGACCGCATC CGCGAGGACG ACTCCATCGA GAAGATCGAA GTGGTATGA
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Protein sequence | MSESITIHRR TILQAGIATA AVFPLLAACA TGGGSGDDDE ETTEPTGDVD PDNPFNVPAD VEVDTVIFDG GYGIDYVEFA ADLFEQLHEG SSVAVAPSTQ IATEMQPRFV GGNPPDLIDN SGAQAMGFNT ILEQLEDLND VFDAPNLEGE IIRDTVYAGS ELPGTFNDKF VAINYVLTVY GVWYSGSLFD ENGWTPPTTW DEAKELGAAA AEQDLKLFVW GQEAATYYQT LAVDSAIIEA GDELRLALEN LQPDCWSHEA LQDVFAALKE IVDLGYFVPG GSGTQFTAAQ ARWSNDRQAL LYPSGSWIEN EMNKENQVAE GFEMKGVATW PLSSSSAMPA GTLHSTAGEP FVVPTDANSV ESGKEMIRIM LSREAAENFA RSKLAPTIVM DTVPEDGFGS TALVSQQEML AAAGENKFTW NFVGTYGMNQ EQLVIWNSFL DGAKSVDDLT SELQAITDRI REDDSIEKIE VV
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