Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3982 |
Symbol | |
ID | 7858045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4404719 |
End bp | 4406026 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643868085 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002883985 |
Protein GI | 229822459 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.71759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAT CCATCTCGGG GACACCGCTC GCCCGGCGGA CCGTCCTCGG CGCCGGCGCC GCATCCGCCG CGGCATTCCT CGCGGCCTGC AGCAGTGGCG GCAACGGCGG GAGTAGCTCC GGGAACGGCG AGGGCGGCGA GCTGAAGCTG CTGCTCATCG GCGGCAGCCC CGAGCTCGAC ACGTTCGTCA ACGAGACCCT GCTGCCCGAG TTCGCCGATT CGAGCGGCTA CACGGTCACC CTCGAGAAGG TGGACTGGGG CTCCGCGTTC CAGCAGGTCA CCACGGCCGC CGGTACCGGA ACGCTGGCGG ACGTGCTCCT CATCGGCGGC ATCTGGACGG CGCCGCTCGC GGACCGGGGC GCCCTCCTCG CGCTCGACGA CCACGTGGCG TCCTGGGGCG ACCTCGACAG CTTCTACCCC GGGATGATCG AGGACGGCGC GTTCGACGGC TCGCAGTATG CCCTCCCGCT CTACTCCGAC ACGCGCACCA CGCTCTACCG CGCCGACCTC CTCGAGCAGG CGGGCGCCGA CCCGAGCTCC CTGCCGAGGA CCTGGGAGGA GTTCCGTTCC CTCGCGGAGC AGATCCAGGC CGCCCGAGTC GAGGGCGTCA CTGCCGCCGT CGACTGGGGC CAGGACCAGA GCATCGGCCT GCAGCAGACG TTCGCCCAGC TCCTGCTGCA GGCGGGCGGC ACCTACTACG ACGAGTCGGG AAAGGCGCAG TTCTCCTCCG AACCCGGGGT CCTGGCGCTC GAGTACCTGA CGGGGTTCTA CCGGGACGGC CTCGCCGACG TGAACATGCA GGACCAGGGC ACCGGACCGC GCGCGCTCGT CGCGGGCCAG GCGGCGATGA CGTACACCGG CACCTTCACG GTCCGCAACG CCGTCGACAA CGCGCCTGAG ATCGTCGAGC AGCTCGTGGC GGGGCCACCG CTCATCGGAC CGAGCGGTTC GCCGGTGACG AGCGCCTGGA TCAACAAGCT GGGCATCGCT GCGTCGACCG ACGACCCCGA CGGCTCCTGG CAGCTCGTCG AGCACATGCT GTCCCGCGCG AACGTGGAAC AGCTCGACGC GCTCTTCGGC GGGCTCCCCG CTCGCAGCGA CCTCACAGAC GCCGAGTACC TCACGGACAC GCCGCCGGGG TTCATCGAGG CCGCGGAGCA CATCGTGCCG CAGCCGGCGC ACCCGAACAT GCTCCAGATC GCACCAGAGA TCAACACCGC CATGCAGGAC GCGATCCGCA ACCCCGACGA CGTCGAACGC GTGCTCGCCG ACCTGGACGC CACGATCGAC GAGATCAATG GCGTCTGA
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Protein sequence | MSRSISGTPL ARRTVLGAGA ASAAAFLAAC SSGGNGGSSS GNGEGGELKL LLIGGSPELD TFVNETLLPE FADSSGYTVT LEKVDWGSAF QQVTTAAGTG TLADVLLIGG IWTAPLADRG ALLALDDHVA SWGDLDSFYP GMIEDGAFDG SQYALPLYSD TRTTLYRADL LEQAGADPSS LPRTWEEFRS LAEQIQAARV EGVTAAVDWG QDQSIGLQQT FAQLLLQAGG TYYDESGKAQ FSSEPGVLAL EYLTGFYRDG LADVNMQDQG TGPRALVAGQ AAMTYTGTFT VRNAVDNAPE IVEQLVAGPP LIGPSGSPVT SAWINKLGIA ASTDDPDGSW QLVEHMLSRA NVEQLDALFG GLPARSDLTD AEYLTDTPPG FIEAAEHIVP QPAHPNMLQI APEINTAMQD AIRNPDDVER VLADLDATID EINGV
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