| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3941 |
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| Symbol | |
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| ID | 7858004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4360201 |
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| End bp | 4361673 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643868044 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002883944 |
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| Protein GI | 229822418 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.486977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA CACGTCGAGC ACGCACGACC TGGCGCCTCG CGGCCGCGGC CGCGGGAGGC
GCGCTGCTGC TGAGCGGCTG CAACCTCGTC GGCGGCGATC CCGGCTCGGA CGACGACTCC
ACGGCCGAGG GCGACGGCGA GGAGGTCACG CTGACCGCCG CGATCGTCCC CGACCCGCCG
GGCGCGAGCG AGTTCTACCG CGCCCAGTTC GACCTCTTCG AGGAGGCGAA CCCCGGCATC
ACCGTCGACG TCATCGAGAA CCCCTCCGAC CAGCAGCTCA ACGCGATCGA GCTGATGTTC
CAGCAGGGCG AGTCGCCCGA CGTCTTCCGG GCGCAGGGCA CGGAGGCGAT GAACCGCTTC
TACGACCGCG GCTGGCTCGC GCCGCTGGAC GAGCTCGAGA CCGACGAGTT CATCGCCCGC
TTCCCGGAGG GGTCGATGGA CCCCGCCGTC TCCGGCCTGC ACCGCGAGGA CCACCTCGTG
AGCCTGCCGC TCGTGTGGGG CGACTGGGGC CAGACGAACC TGCTCATCTA CAACGCCGAC
ATCCTCGCGG AGAACGGGTT CGACGGCCCG CCCGAGACGT GGAGCGAGTA CGAGGAGATG
GCCCGCACCA TCACGGAGAA CGGCGGCGGC GACGTCTTCG GCACCGCCCC GGCCGGCCCG
AACGGCGGCA GCATCTCGAT GTTCGCGAAC ACCGCCGCGC CGTCGTCGGT CGGCACCGGC
ATCGACCTCA CGACCGGTGA GCCGTCGTAC ACGAACCCGC AGGTCGTCGA GCTCGTCGAG
CAGTGGCGCG GCATGCAGGC CGACGGCGTG TTCCAGCCCG GCTGGGAGAG CTGGGACGGC
GCTCGCGCGT TCAGCGAGTT CGCCGCCGGG CGTCTCGCGA TGTACGCCTC GGCGACCTGG
CACGTGGCCG AGATCCGGAA GCTCGACCCG GAGATCGCCA TGGAGCTCGC GCCGATCCCG
GTGCCCGACT CCGGCCGGGT GGCGTACTCG CCGCGCTCCG TCGCGCAGCA GCCGATCTGG
AGCATGTCCG CCGAGTCGGA GCACCCCGAG GAGGCGCTCA AGCTCATGGA CTTCCTCGCC
TCGATCGACT TCTACGCGGC GTACTACGAG GAGTTCGGCT CGTTCACCGC GTCGATGCAG
GCGTGGGAGG ACGCGGCGCG GGAGAACCCC GACCAGGCCG GCATCCTCGA CGTCGCCGAG
GAGACGATCC GGACCTCCCC GAACCCGCAG CTCGCCGGCG AGGGTGCCGA GGAGTTCTGG
GCGGCGGCCA GCGCGAACCC GGACCTCAAG TGGGGCCTCG CCGCCGACGA GTCGATCATC
AACAACTCGG AGTACCTGCC GATCGCCGAG GCGCGCACGC AGGCCATGGA GGCACTCATC
GCGGAGTACG AGGCCGACGA TCCCGAGCTG CGCGAACAGC TCGCGTTCGA GGACTGGGAC
CCGCTGACGG ACTACGCCCC CGCCGCCGAG TAG
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| Protein sequence | MKRTRRARTT WRLAAAAAGG ALLLSGCNLV GGDPGSDDDS TAEGDGEEVT LTAAIVPDPP
GASEFYRAQF DLFEEANPGI TVDVIENPSD QQLNAIELMF QQGESPDVFR AQGTEAMNRF
YDRGWLAPLD ELETDEFIAR FPEGSMDPAV SGLHREDHLV SLPLVWGDWG QTNLLIYNAD
ILAENGFDGP PETWSEYEEM ARTITENGGG DVFGTAPAGP NGGSISMFAN TAAPSSVGTG
IDLTTGEPSY TNPQVVELVE QWRGMQADGV FQPGWESWDG ARAFSEFAAG RLAMYASATW
HVAEIRKLDP EIAMELAPIP VPDSGRVAYS PRSVAQQPIW SMSAESEHPE EALKLMDFLA
SIDFYAAYYE EFGSFTASMQ AWEDAARENP DQAGILDVAE ETIRTSPNPQ LAGEGAEEFW
AAASANPDLK WGLAADESII NNSEYLPIAE ARTQAMEALI AEYEADDPEL REQLAFEDWD
PLTDYAPAAE
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