Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3861 |
Symbol | |
ID | 7858674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4278804 |
End bp | 4281311 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643867965 |
Product | protein of unknown function DUF404 |
Protein accession | YP_002883865 |
Protein GI | 229822339 |
COG category | [S] Function unknown |
COG ID | [COG2308] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0998608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATG TGCTCGCCGG CTACCGGGCG GGCGGACCCG GCCACGACGA GATGCTCCAG TCCACCGGGG CCGCACGGGC CGCGTGGGCG CAGATGGCCG ACCTCGTCGG CCTGCACCAC GGCGAGCAGC TGGCCCAGCG CGCCGCCGAC GTCGTCGCCC TCCTCGAGGA CCACGGCGTC CGGCACGGCG CCGACGACGC GGGCGGCACG GGCCGGCCCT GGCTCCTCGA CCCGCTCCCC GTGCTGCTCG ACGAGGTCGA GTGGGCGCGC ATCGAGTCCG GGCTGCGGCA GCGGGCGCTC CTGCTCGACC TCGTGCTCAC CGACCTGTAC TCCGGCGCCG AGCTCCTCAC GCGGGGCGTC CTCCCACCGG CCCTGATCCT CGGCCACCGC GGGTTCGTCC GCGCCGTCGA CGGCATCCGC GTGCCGGGCG AGCACCAGCT GTTCACGCTC GCCGTGGACC TCGCGCGCAA CGCCGACGGC GGCTGGCAGG TTCTCGCCGA CCGCGCCCAG GTACCCACCG GGATGGGCTA CGCGATGCAG GACCGCCGCA TCGTGGCCGA GGTGCTCAGC GGGCTGTACC GCCACGCACG CATCCGCCGC ATCGGGCCGT TCTTCCAGGC GGTGCGCCAC GCCGCGGCCG AGGTCGCGCC CGCCGGCGCC GGCGACGCGC CCCGGGTCGC CCTGCTCACG CCCGGACCAG ACTCCCCCGC CGCGTTCGAC CAGGCGTACC TGGCCACGAT GCTCGGCTAC CCGCTCGTGA CGGGCGAGGA CCTCGTGGTG GCCGACGGGC GGCTCTGGAT GCGCTCGCTC GGCCGGCTCG AACCCGTGGA CGTGCTGCTG CGCGCCGTCG ACGCCGAGCA CTGCGACCCG CTCGACCTGC GTGGCGACTC CCGGCTCGGC GTCGCCGGCC TCGTGCAGGC CGCCCGAGCG GGCGCCGTGT CGGTCGTCAA CCCGCTGGGC AGCGGCGTGC TCGACAACCC CGGGCTGCTC ACCTACCTGC CCCGGCTCGC CCGCGAGCTG CTCGGCGAGG AGCTCGCGAT CGGGTCGGCC GTCACGTACT GGTGCGGCGA ACGGTCGATG TGCTCGCACG TGATGGCGAA CCTCGACCGC CTCGTGGTGC GCCCCACGGC CCCCGGCGCG CCGGCCGTCC GCGGCTGGGA CCTCACGCTG CACGAGCGTG CGGACCTCGC CGCCCGCATC GCCGACCGCC CGTTCGCCTG GGTCGGCCAG GAACCGATCG AGGCCTCGAC CACGCCCACC GTGGCCGGGT CGGCCCTCGA GGCGAGGCCG ACGACGCTGC GGGCGTTCGC CGTCGCCGGC ACCCGCGGCT ACCAGGTGAT GTCGAGCGGC CTGGCGCGCG TGACCCCGGA GGACACCGTG CTCACGGACC CCGGCCCGCT CGACGCCGCG AAGGACGTAT GGGTGCTCTC CTCCGAGCCG TACACGGTGG CCGATCCGTG GGTCGGCGAG GCGGCGGCGC CGTCGTCCAC CGGCGGGACG GCGCACCTCC CGGCGTCCAT CTCCCCCGGA GCGGCCGAGG ACCTGTTCTG GTTCGGCCGG CACGCGGAGC AGGCGGAGCA GACGGTGCGG CTCGTGCGGG CCGTCTCCGA CCGGTGGAAC GACTTCCACG CCTCTCCCGC GAACGTCGGA GCCCGCGCCC TCGACGTCTT GCTTGACGCG GTGGCCACCG TGGCGGCGTC CGGGAGCCTG TCCGAGGTCG TGACGGACGC CCGGCGGCCC GGTTCCGTGG CGCACACCGA GGCGAAGCTG ACCCGGACGG CGACGGCGGT GCGCGACCAG CTCTCCGGCG ACACGTGGCT CGCGCTCTCC GCCATCGAGC GGGCGATCGC ACGCGAGCGC GCGCACCACG AGCGCGACCC GGGCTCCGAG CTCGGACCCG TCCTCGCCCG GCTCCTCGAG GGTCTCCTCG CGCTGTCCGG TATCGCGGCC GAGTCGATGG TGCGCGACGC CGGCTGGTCG CTCATGGACG CCGGCCGGCG CCTGGAGCGT GCGCGCTGGC TCGTCGACAC GCTCGCCGCC ACGCTCACGC GCCTCCGCAG CGGCGACGTC GACTCGCTCG TGCTCGAGTC GGTGCTCATC GCCCACGAGA GCGTCATCAC GTACCGCCGC CGCTACCAGG CACGCGCGAG CGTCGGCACC GTGCTCGACC TCCTGCTCAC CGACGCCGCG AACCCCCGCT CCCTGCGGTT CCAGCTCGTC GCGCTCGGGG CGGACCTCGC CGCCGTCCCC GCCCCCGCCC GAGGCACCGC CGCCCGCGAT GCCCTGCTGG CCGACGTCGT CGACCTCCTC GACGAGCTCG ACACCCGTGC CGCCGCTGCC GCCGGCGACG ACGGCGTCCG GTCCCGTCTC GCGGAGACGC TCGAGTCGAT GCGGTGGCGC CTCGCCGAGC TCGGCGAGGA GATCGCCCGC GTCCACTTCA CGCATCCGGT GCCGGTCCCG TGGCTCGACG CCTCCCTCGC GTGGGCACCC GACGGGACGG CGTCGTGA
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Protein sequence | MTDVLAGYRA GGPGHDEMLQ STGAARAAWA QMADLVGLHH GEQLAQRAAD VVALLEDHGV RHGADDAGGT GRPWLLDPLP VLLDEVEWAR IESGLRQRAL LLDLVLTDLY SGAELLTRGV LPPALILGHR GFVRAVDGIR VPGEHQLFTL AVDLARNADG GWQVLADRAQ VPTGMGYAMQ DRRIVAEVLS GLYRHARIRR IGPFFQAVRH AAAEVAPAGA GDAPRVALLT PGPDSPAAFD QAYLATMLGY PLVTGEDLVV ADGRLWMRSL GRLEPVDVLL RAVDAEHCDP LDLRGDSRLG VAGLVQAARA GAVSVVNPLG SGVLDNPGLL TYLPRLAREL LGEELAIGSA VTYWCGERSM CSHVMANLDR LVVRPTAPGA PAVRGWDLTL HERADLAARI ADRPFAWVGQ EPIEASTTPT VAGSALEARP TTLRAFAVAG TRGYQVMSSG LARVTPEDTV LTDPGPLDAA KDVWVLSSEP YTVADPWVGE AAAPSSTGGT AHLPASISPG AAEDLFWFGR HAEQAEQTVR LVRAVSDRWN DFHASPANVG ARALDVLLDA VATVAASGSL SEVVTDARRP GSVAHTEAKL TRTATAVRDQ LSGDTWLALS AIERAIARER AHHERDPGSE LGPVLARLLE GLLALSGIAA ESMVRDAGWS LMDAGRRLER ARWLVDTLAA TLTRLRSGDV DSLVLESVLI AHESVITYRR RYQARASVGT VLDLLLTDAA NPRSLRFQLV ALGADLAAVP APARGTAARD ALLADVVDLL DELDTRAAAA AGDDGVRSRL AETLESMRWR LAELGEEIAR VHFTHPVPVP WLDASLAWAP DGTAS
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