Gene Bcav_3805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3805 
Symbol 
ID7860544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4223351 
End bp4225336 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content75% 
IMG OID643867908 
Productsmall GTP-binding protein 
Protein accessionYP_002883809 
Protein GI229822283 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCTCAC CCCTGCCCTA CCTCAACCTC GGGATCGTCG CGCACGTTGA CGCCGGCAAG 
ACGTCCCTGA CCGAACGCCT GCTGTACGAC GCGGGCGTCG TCGACGCGCC CGGGAGCGTC
GACGCGGGCA CCACCCGCAC CGACTCGATG GATCTCGAGC GCCGCCGCGG CATCACGATC
CGCGCGGCCG TGACGTCGTT CCCGGTCGAC GACGTCACCG TCACCGTCAT CGACACGCCG
GGCCACCCCG ACTTCATCGC CGAGGTCGAG CGCTCGCTCG CCGTGCTCGA CGCGGCGGTG
CTCGTGCTCT CGTGCGTCGA AGGGGTCCAG TCGCAGACGG TCGTGCTGTG GCGGGCTCTG
CGACGCCTGC GGATCCCGAC CGCGCTGTTC CTCAACAAGG TCGACCGCGC GGCCGCCGAC
GTCGAGCGCA CGCTCGCTCA GGTGCGCCGA CGACTCGACG CCGATCTGGT CACGCTCACG
CGCGCCGAGC ACGTGGGCAC ACGCGAGGCG CGCGTCCACG CCGTGCCGCT CACCGACGCG
TCGGTCGTCG AGGCGGTGGC CGCCGCCGAC GACTCGGTCC TCGCGCGGTG GGTCGACGGC
GCCCCGGTGC GCGCCCGTCA GGTGCGCCAC GCGCTGCGCC GCGGCGTGCG GGCCGGCACG
CTCGTCCCCG TCGTGTGCGG CTCGGCGATC ACGGGAGCCG GGACGGGCAT GCTGCGGCAG
GTGCTCACCG ACGTGCTCCC GCGAGCGCCG CGCCGCGAGG GTCCCGACGA CGGCGGACCC
GCCGCCACCG TGTTCGCCGT CGACCGCGAC GACCGCGGCC GGCGCGCGTG GCTCCGCTCC
TGGTCCGGGA CGATCCGGGT GCGCGACCGC GTCTCGCTCT CGGGGAGGGC ACCGGAGCTC
GTCACGGAGA TCGCCGTGAG CGGGGCGTCG GGGCTGCACG CGGCGGACGA GGTGCGCGCC
GGGGAGGTCG CCGTCGTCCG CGGCCCGACC ACGTCCCGCA TCGGCGACAC GGTGGGTCGC
CCCCCGGTGC GACAGGAGTA CCGGTTCACC CCGCCCACGC TGCAGTCGCT CGTCGAACCG
GTGGACCCCG CGCAGCGCAC CGCGCTGTAC GCGGCGCTCA CCGACCTCGC CGACTCCGAC
CCGCTCATCG GACTTCGACT GGACGAGACC GACGGCGAAG CGGCCGTCAG TCTGCACGGC
GAGGTGCAGC GGGAGGTCGT CGCGGCGCTG CTCGAGGAGC AGTTCGGCGT GCGTGCCCGG
TTCACGTCGA CGTCGACGAT CTGCCTCGAG CGGGTCGTCG GCGTGGGTGA GGCGGTGGAG
CAGATCAGCG CCGGCGGCAA CCCGTACCTG GCCGGCATCG GCCTGCGGGT CGAGCCGCTG
CCCGTGGACA GCGGCGTGAG GTTCTCCCCG GGGATCGAGC GGGGCAACCT GCCCCCCGCG
TTCATCGCCG CCACCGAGGC GGGCGTGCGT GCCGGTCTGC GCGCAGGCCC GTCCGGCTGG
GCGGTGACCG ACTGCCTCGT CACGATGACC GCCTCCGGGT ACTACCCGCG CCAGAGCCAC
GCGCACCAGA AGTTCAACAA GGCCATGTCG AGCGTCGGTG CGGACTTCCG CAACCTCGCA
CCCGTCGTGC TGCACGCCGC GCTGGCCAGC GCCGGCACGC AGGTGTGCCG ACCGTTCGAC
GCGTTCGAGC TGGACCTTCC GGAGCGGACG CTCGGATCGG TGGCTGCGCT GCTCGGCAGG
CTGAGCGCGG CGACGACGGC CTCGACGGCG GAGCGCGGCA GCGTCCGCCT GCTCGGTCAC
GTCCCCTCGG CGCACGTCGA CGCGCTCGCC CGCGCTCTGC CGGACCTGAC CGCCGGGGAG
GCGGTGCTGG TCACGCGGCT CGACCACCAC GCGCCGGTAC CGCGCGGGAC GGAGCCGCCG
ATACGGCGTC GGACGGGGCC CGACCCGCGG GACCGGGAGG GATGGTTCCG CGACGTGCCA
CGCTGA
 
Protein sequence
MPSPLPYLNL GIVAHVDAGK TSLTERLLYD AGVVDAPGSV DAGTTRTDSM DLERRRGITI 
RAAVTSFPVD DVTVTVIDTP GHPDFIAEVE RSLAVLDAAV LVLSCVEGVQ SQTVVLWRAL
RRLRIPTALF LNKVDRAAAD VERTLAQVRR RLDADLVTLT RAEHVGTREA RVHAVPLTDA
SVVEAVAAAD DSVLARWVDG APVRARQVRH ALRRGVRAGT LVPVVCGSAI TGAGTGMLRQ
VLTDVLPRAP RREGPDDGGP AATVFAVDRD DRGRRAWLRS WSGTIRVRDR VSLSGRAPEL
VTEIAVSGAS GLHAADEVRA GEVAVVRGPT TSRIGDTVGR PPVRQEYRFT PPTLQSLVEP
VDPAQRTALY AALTDLADSD PLIGLRLDET DGEAAVSLHG EVQREVVAAL LEEQFGVRAR
FTSTSTICLE RVVGVGEAVE QISAGGNPYL AGIGLRVEPL PVDSGVRFSP GIERGNLPPA
FIAATEAGVR AGLRAGPSGW AVTDCLVTMT ASGYYPRQSH AHQKFNKAMS SVGADFRNLA
PVVLHAALAS AGTQVCRPFD AFELDLPERT LGSVAALLGR LSAATTASTA ERGSVRLLGH
VPSAHVDALA RALPDLTAGE AVLVTRLDHH APVPRGTEPP IRRRTGPDPR DREGWFRDVP
R