Gene Bcav_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3794 
Symbol 
ID7860533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4210606 
End bp4211739 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content73% 
IMG OID643867897 
Productoxidoreductase domain protein 
Protein accessionYP_002883798 
Protein GI229822272 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG GGCTGAGCAT CGCCGTCGTC GGACTGGGGT TCGGCGGCGA CTTCGTGCCG 
CTCTACCAGG CGCACCCCGA CGTGGGACGG GTCGGCGTCG TCGATCTCGA TCCTGCCCGG
CTCGACCGCG CCGGCCGCGT GTTCGGCATC GAGGACCGGT ACACGCGCTA CGAGGACGTG
CTGGACGACC CCACCTGGGA CGCGGTGCAC GTGCTCGCGC CGGTGTCGTT CCATGCCGGG
TACACGGTCG CCGCGCTGAC GGCGGGCAAG CACGTCGCCT GCGCCGTGCC GATGGCCACG
GAGCTCGACG ATATCGACGA GATCGTCCGT GTCCAGGTCG CCTCCGGCCG GCGCTACATG
ATGATGGAGA CGTCGGTCTA CCAGTGGCAG TTCCGCGCCA CGCAGCGGAT GCTCGCCGCC
GGGGAGCTCG GCGATCTCAC GCTCTACCAC GGTGTGCACA TCCAGAACCT CGACGGCTTC
CCGCGGTACT GGCAGGGCTA CCCCCCGATG CAGTACCTCA CGCACGCTCT CTCCCCGGCG
CTCTCGCTGA CCGGGACGAC CGTGCGCGAC GTCGTCGCGT ACGGCACGGG GCGGCTCTCG
CCCGATCGGG TGGGCGAGTC GGGCAACCCG TTCCCGACCG AGGTCGGCCT GTTCCGCCTG
CACGGCCACG ACCTCGTGCC CGAGGTGACC ATGTCGTTCT TCCAGGTCGC TCGGCCGTAC
ATCGAGGGCT TCAGCGTGTA CGGGACCGCG GCCGGCGTGG AGTGGCCGCT CGACGAGCAC
CTGCCGCCGC GTCGGTACGA CCTGCTCGAC GTCCCCGCCG GTCACCGCGG CAGGCCGGCG
TCGACAGCGG AGGTCGCCGA GGAGCGGGGC GCCGACCTGC TCCCGGCGTC GCTGTCGCCG
TTCGTCGCGC CACACGAGAT CCGCCCCGTC GACGGCAGCG CGCCGTACCG CCTCGGCGCG
GGGCACGGCG GCTCGCACCC GCACCTCGTC CACGAGTTCG TGAGCGCCGT CGTCGCCGAC
CGCGAGCCGG CGATCGGCAC GGCGACCTCC GCCGCGTGGA CCGCACCGGG CATCTGCGCC
CACGAGAGCG CCCTGCGCGA CGGCGAACGC GTCACCGTCC CGCAGTACGC CTAG
 
Protein sequence
MSAGLSIAVV GLGFGGDFVP LYQAHPDVGR VGVVDLDPAR LDRAGRVFGI EDRYTRYEDV 
LDDPTWDAVH VLAPVSFHAG YTVAALTAGK HVACAVPMAT ELDDIDEIVR VQVASGRRYM
MMETSVYQWQ FRATQRMLAA GELGDLTLYH GVHIQNLDGF PRYWQGYPPM QYLTHALSPA
LSLTGTTVRD VVAYGTGRLS PDRVGESGNP FPTEVGLFRL HGHDLVPEVT MSFFQVARPY
IEGFSVYGTA AGVEWPLDEH LPPRRYDLLD VPAGHRGRPA STAEVAEERG ADLLPASLSP
FVAPHEIRPV DGSAPYRLGA GHGGSHPHLV HEFVSAVVAD REPAIGTATS AAWTAPGICA
HESALRDGER VTVPQYA