Gene Bcav_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3575 
Symbol 
ID7860839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3972015 
End bp3973625 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content71% 
IMG OID643867678 
Producthypothetical protein 
Protein accessionYP_002883579 
Protein GI229822053 
COG category[S] Function unknown 
COG ID[COG5368] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.196145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACACC GATGGTTGAC CGCGTCCGGC GCGGCACTGG TCGCGGGCGC GATGGCGTTC 
GCGGCACCGG CGGTCGCGGC ACCGGCCGCA CCCGAACCGC AGGGGGGCGG CGGAGGCGGG
GGCGGTGACG ACGGCCTCGA CCGTCGTGAC CGGCGCGAGC TCATGCGCTG GGCGAACGAC
ACGTGGGCGT CGTTCGTCGC CATGACCGAC GAGGAGACGG GGCTGCCGGC CGACAACATC
GAGGGTGACC TCGACACCGG CACCCGGTCC GGCTACACGT CGCCGACGAA CATCGGCGGC
TACCTCTGGA GCACGGTCGT GGCCGACGAG CTCGACATCA TCTCCCACGG CGAGGCGCTG
CGCCGGATGC GGCAGACGCT CCGCACGCTG AACGAAATGG AGAGGCACGA GCCGAGCGGC
TTCTTCTACA ACTGGTACGA CGAGGCCACG GGCGAGAAGC TCACCGCGTT CCCGAACGGC
GAGACCATCT ACCCGTTCCT GTCGAGCGTC GACAACGGCT GGCTCACGGC CGCCCTGATG
GTGGTGCGGA ACGAAGAGCC CTCGCTGCGG CGGGCGGCGG ACCGGCTGCT CGACGACCAG
GACTACGGAT GGTTCTACGA CCCGACGTTC CGCGGTCCCG ACCGGCCCGG CCTGCTCTTC
GGCGGGATCT TCGTCGACAC GCCTCCCGAC ACGCAGTGCG CCAACCTCGG GCCGGCGCCC
GGTGCGAACG GCGGCGAGGG GTCCGAGGAG GAGGTCTGGC TGACGTGCCA CCACTACGAC
CTGCTGAACT CCGAGCCGCG GATCGCCAGC TACATCGGCA TCTCCCGCGG TGAGATCCCG
CGCGAGCATT ACTTCGCCGG CTACCGGACG TTCCCGGCCA CGTGCGACTG GGACTGGGCC
GAGCAGCAGC CGAGCGGCTT CGACGCCGAG CACCTCGGCC AGCCCGTGTT CGAAGGCTCC
TACACGTACC GCGGCATGCA GATCGTGCCG ACCTGGGGCG GGTCCATGTT CGAGGAGCTC
ATGCCCGACC TGTTCGTCCC CGAGGCGGAC TGGGCACCGA ACAGCTGGGG CGTCAACCAC
CCGCTCGCCG TCCGGGCGCA CATCGAGCAC GGCCTCGAGG AGACCGGGTA CGGCTACTGG
GGCTTCTCCC CCGCCTCGCA CCCGTTCGGC GGCTACTCCG AGTGGGGCGT CGACGCGATC
GGGATGCAGA ACGAGGGGTA CCCCTCGGAC GTCGAACGCA CCAACTGGGA CGGCGGCTTC
GGAGACTGCC GCCCGGCCGC GAACCCCGAT CCGGACTGGG GCGACGGCGT CGTGACGCCG
CACGCCGCCT TCCTCGCGCT GCCGTACGCG CCGCAGGAGA CGATGTCCAA CCTCCGCGGC
ATCGAGGACG AGCTCGAGGC CTACGGCCCC GGCGGGTTCT ACGACGCCGT GGCCGTCCAC
TCGGGACAGT CGGCGGAGCG CTACCTGTCC CTCGACCAGG GCATGATCAT GGGTGCGCTC
GGCAACGTGC TGGGTGACGG CGTCCTGCAC GACGCGTTCA CCCGCGGCGA CGTCCGCGAG
CACATCCGCC CGCTCCTCGC ACTCGAGACG TTCTCGGCCG GCGAGGGCTG A
 
Protein sequence
MRHRWLTASG AALVAGAMAF AAPAVAAPAA PEPQGGGGGG GGDDGLDRRD RRELMRWAND 
TWASFVAMTD EETGLPADNI EGDLDTGTRS GYTSPTNIGG YLWSTVVADE LDIISHGEAL
RRMRQTLRTL NEMERHEPSG FFYNWYDEAT GEKLTAFPNG ETIYPFLSSV DNGWLTAALM
VVRNEEPSLR RAADRLLDDQ DYGWFYDPTF RGPDRPGLLF GGIFVDTPPD TQCANLGPAP
GANGGEGSEE EVWLTCHHYD LLNSEPRIAS YIGISRGEIP REHYFAGYRT FPATCDWDWA
EQQPSGFDAE HLGQPVFEGS YTYRGMQIVP TWGGSMFEEL MPDLFVPEAD WAPNSWGVNH
PLAVRAHIEH GLEETGYGYW GFSPASHPFG GYSEWGVDAI GMQNEGYPSD VERTNWDGGF
GDCRPAANPD PDWGDGVVTP HAAFLALPYA PQETMSNLRG IEDELEAYGP GGFYDAVAVH
SGQSAERYLS LDQGMIMGAL GNVLGDGVLH DAFTRGDVRE HIRPLLALET FSAGEG