Gene Bcav_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3480 
Symbol 
ID7858372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3873053 
End bp3873883 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content78% 
IMG OID643867580 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_002883484 
Protein GI229821958 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCCG GGAGTGCGGA GGACGACGGC GTCGCACCGA TGCGGCTCGT CACGCTCAAC 
CTCCAGCACG GGCTCGGGAC GGGCGGCGGG GCGCTCGACG CCGACGCGCT GGCGGCCGCC
GTCGCCCCGC TCGCCGGGAC GCATGTGCTC GCGCTCCAGG AGGTCGACCG CGGGCAGGTG
CGCAGCGGCG GTCTCGATCA GGCGGCGGTC GTGGCCGCCG CCCTCGGCCT GCCGCACGTG
CGGCAGGCGG CCGCGCTCGT CGGGAACGTG CGGGCCGGCG TCGTCCGCCC CGACCGGGCA
GGCGCGGAGC ACCCGGAGTC ATACGGCGTC GCCCTGCTGA GCGCGTTCCC GGTGCTCGCC
TCGTTCGCCC AGCCGCTGCC CGGCGGCTGG GTGCGGTGGC CGCGACGACG CGCGGGGCGC
TGGCGCGTGG CGATCGACGA GCCCCGCGTC GCCCTGGCGG CGGTGCTGGA CGTGGCGGGC
GGGCCGGTGA GCATCGCCAC GACGCACCTC TCGACGTTCC CGGCGACGGC GACAGGCCAG
CTGCGCCGCG TCGTGCGGCT GGTGCGCGGG ATGCCCGGCC CGCGGCTCGT CTGCGGCGAC
CTCAACCTGA GGACGCCGTC CGTGCGGCTC GCGACGGACC TCGCCCCGCT CGCGCGCGGC
GACACCTACC CGTCGTGGGC ACCGACGCGC GAGATCGACC ACGTGCTGGG GGAGGGGTGG
GCGCTGCCCG AGGGGCCGGG CGCGCCGCTT CCCGCGCTCG ACGTCGCCGA CCACCGACCG
GTCGCCGTCA CCCTCGGCCT CCCGTCCGCC CCCGCCCGTG GATATCGCTG A
 
Protein sequence
MSPGSAEDDG VAPMRLVTLN LQHGLGTGGG ALDADALAAA VAPLAGTHVL ALQEVDRGQV 
RSGGLDQAAV VAAALGLPHV RQAAALVGNV RAGVVRPDRA GAEHPESYGV ALLSAFPVLA
SFAQPLPGGW VRWPRRRAGR WRVAIDEPRV ALAAVLDVAG GPVSIATTHL STFPATATGQ
LRRVVRLVRG MPGPRLVCGD LNLRTPSVRL ATDLAPLARG DTYPSWAPTR EIDHVLGEGW
ALPEGPGAPL PALDVADHRP VAVTLGLPSA PARGYR