Gene Bcav_3354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3354 
Symbol 
ID7860320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3727496 
End bp3728755 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content76% 
IMG OID643867454 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_002883359 
Protein GI229821833 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGACG GCGCCGACTA CGCGGCGCAC CTGGTCGACG ACGTCCTCGC CTGGTGGATG 
TCGCACGGCC CGGACGCCGA GCACGGCGGC GTGCTGACGT GCTGGTCCAA CGACGGCGCC
CGGCTCGTCT CGCACGACAA GTACACGTGG TCGCAGGGGC GGTGGGCGTG GCTGACCGCC
CGGGTGGCGC AGGCCGCCCG CGCCGGCGTC CTCGCCGTCG ACCCTGAGCC GTACGCCGAG
CAGGCCGAGC GCACGGCCCG GTTCGTCCGC GACCGCGCGC TGTGCGCCGA CCGCACGACG
GCGTACGTCA CCACGCGGGC CGGCGAGCCG TTCGAGCCGG TGCCCGGGCG CGGCCTCGCG
ACGAGCGTGT TCGCGGACCT GTTCGCGGCG CTCGGCTTCG CGGGGGTGGA GCACGTGCGC
CCGGGCGAGG GCTGGGGCGA GCTCTCCCTC GAGGTGCTCC GGGCCGCGGC CGAGCGCATC
GCCTCGGGGG AGTTCCGCTC GGACCCCTAC CCGGTCCCGC CGGGCTACGG CTCGTTCGGG
CTGCCGATGA TCCTCGTCGG CGTCGGGGAG CAGGTGTACC GGGCGACGGC GGACACGGAG
GCGGCAGCGA TCGTGCGTGC TGCCGCGGCG GACATCGGCG CACGGTTCGT GCGCGGCGAC
GACGTCGTCG AGATGCCCGG CCCGGGCGGC GTCGACGACC CGTCGCTGCT GGCGCGGCAC
CGCACGCCCG GTCACGTGCT CGAGGCGCTG TGGTTCCTCC GTCACGCGCG CGACCTGCTC
GGCGAGGCCC GCCTCGCCGA CGACGCCGAG CTCGCGGCGA TCGCGCGGCG CGCCCTCGCG
CTCGGCTGGG ACGAAGAGCG GGGCGGCCTC TTCCGCTACG TCGACGCGGC GGGCGGCGCG
CCGGCGGGGG AGCGCGACGG CGAGGCGTAC ACCGAGCTGG TGGTCGCCAC GTGGGACACC
AAGCTGTGGT GGCCGCACGC CGAGGCGCTC TACACGACGC GCCTGCTCGC GTCCGCGACC
GGCGATCCCG CCCTGGCCGC CTGGGCGGAG CGCGTCGAGA GCTACACGTT CGCCACGTTC
CCCGACGGGT CCGGCCGGGA GTGGACCCAG ATCCGGGACC GCTCCGGCGC TCCGGACGCG
CGCACCGTCG CGCTGCCCGT CAAGGACCCC TTCCACATCG CCCGTGCGCT GCTCATGCTC
GTCGAGCTCG ACCCACCCGC AGGCCTCCCC GTGACAGCAC CAGCATCGGA GCACGCATGA
 
Protein sequence
MRDGADYAAH LVDDVLAWWM SHGPDAEHGG VLTCWSNDGA RLVSHDKYTW SQGRWAWLTA 
RVAQAARAGV LAVDPEPYAE QAERTARFVR DRALCADRTT AYVTTRAGEP FEPVPGRGLA
TSVFADLFAA LGFAGVEHVR PGEGWGELSL EVLRAAAERI ASGEFRSDPY PVPPGYGSFG
LPMILVGVGE QVYRATADTE AAAIVRAAAA DIGARFVRGD DVVEMPGPGG VDDPSLLARH
RTPGHVLEAL WFLRHARDLL GEARLADDAE LAAIARRALA LGWDEERGGL FRYVDAAGGA
PAGERDGEAY TELVVATWDT KLWWPHAEAL YTTRLLASAT GDPALAAWAE RVESYTFATF
PDGSGREWTQ IRDRSGAPDA RTVALPVKDP FHIARALLML VELDPPAGLP VTAPASEHA