Gene Bcav_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3305 
Symbol 
ID7861777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3662788 
End bp3663444 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content74% 
IMG OID643867405 
Producthypothetical protein 
Protein accessionYP_002883310 
Protein GI229821784 
COG category[S] Function unknown 
COG ID[COG3828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0127879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCATCG TCGTCCTGGC GGGTACGGGC AGGTACGCCG ACCCGTGGCA CGACTTCCCC 
GGCACGAGCG AGGCGATCGC CGGCGTGCTG CGCAAGGAGG GTCACGCCGT CGAGGTCCGT
CCCACCGAGC CCGACGCGTT CGACCTCGCC GGCGCCGATC TCCTGGTCGT GAACGCGGGC
GGCGGTCTCC ACGAGGACAC GGGCGGCACC GAGTGGGCGG CTGCCCACGC GGCGCTCACC
ACCACGCTCT CCATCGGCAT GCCGGTGCTC GGCGTCCATG CGGCCGCCAA CACGTTCACG
GACGTGCCCG CGTGGCACGC CAGGCTCGGG GGCCGCTGGG TGGTGGGGAC GTCGATGCAC
CCGGAGCGCG GCGAGTCGCG GTTCGACGTC GTCATGCCAC CGCACCCGAT CGTCGCCGGC
CTGCACACGC TCCACGTCGC CGACGACGAG CGGTACAGCC GTCTCGAGAC CGACCCGTTC
GTCGTCCCGC TCCTCGACCA CGCCCACGAC GGGCTCCGCC ACGTCTGCGC CTGGGTGCAC
GACGGCGCGC ACGGCCGGGC CGTGTACGAC GGGCTCGGGC ACGGCGCGAC GTCCTACGAC
TCGCCGGACC GGCGCGAGCT GCTCCTCCGC GAGGTGCGCT GGCTGCTCGG CGCCTGA
 
Protein sequence
MGIVVLAGTG RYADPWHDFP GTSEAIAGVL RKEGHAVEVR PTEPDAFDLA GADLLVVNAG 
GGLHEDTGGT EWAAAHAALT TTLSIGMPVL GVHAAANTFT DVPAWHARLG GRWVVGTSMH
PERGESRFDV VMPPHPIVAG LHTLHVADDE RYSRLETDPF VVPLLDHAHD GLRHVCAWVH
DGAHGRAVYD GLGHGATSYD SPDRRELLLR EVRWLLGA