Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3226 |
Symbol | |
ID | 7857983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3583990 |
End bp | 3585327 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643867327 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_002883232 |
Protein GI | 229821706 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00372602 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCACGC AGACCTCCCC ACCCACGCCC ACCGACGACG ACGTGCCCGA GTTCACCGCC AGCGGCGGCG ACTGGGCGCA GATCGCCGAA GAGGCGGCGC GCCTCGGCGA GGAGCGGATC GTCGTCAACA TGGGCCCGCA GCACCCGTCG ACGCACGGCG TGCTGCGGCT CGTGCTCGAG ATCGACGGCG AGTCCGTCGT CGAGGCCCGA GCCGGCATCG GGTACCTCCA CACGGGCATC GAGAAGAACA TGGAGTTCCG GACCTGGACG CAGGGCGTGA CGTTCTGCAC CCGGATGGAC TACGTGGCGC CGCTGTTCCA GGAGGCCGCG TACTGCCTCG GGGTCGAGAA GCTGCTCGGC GTCGAGGTGC CGGAGCGGGC CACGCTCATC CGCGTGCTGC TCATGGAGCT CAACCGGATC TCGTCGCACC TCGTGGCGAT CGCGACCGGC GGGAACGAGC TGGGCGCGAC GACGATCATG ACGATCGGCT TCCGTGAGCG CGAGGAGATC CTGCGGATCT TCGAGCTCAT CACGGGTCTG CGGATGAACC ACGCGTACAT CCGGCCCGGC GGCGTCGCGC AGGACATCCC GCCCGGCACC ACCGACACCG TCCGCGACGC GTTGCCCCGC ATCGAGCGGG GCCTCGACGA GCTGGCGAAG CTCATGCTCG CCAACCCGAT CTTCAAGGCC CGGCAGGTCG GCGTCGGCTA CCTGTCCCTC TCGGCCGCGA TGGCGCTCGG CGTCACCGGT CCCGTGCTCC GCTCGGCGGG CCTCCCGTTC GACCTGCGCA AGGCCCAGCC GTACTGCGGC TACGAGACGT ACGACTTCGA CGTGCCGACG TCCACCGACT CCGACGCGTA CTCGCGGATC GTGCTCCGGC TGGACGAGGC GCGCGAGTCG ATCAAGATCG TCCGGCAGGT GCTCGAACGC CTCGACGCGC AGGACCGGAC GGGCTCGCAC CCGGTCATGG TCGCGGACAA GAAGATCGCG TGGCCCGCGC AGCTCGCGCT CGGCCCCGAC GGTCAGGGGA ACTCGGCCGA GCACATCCGC ACCATCATGG GCACGTCGAT GGAGGCGCTC ATCCATCACT TCAAGCTCGT GACGGAGGGC TTCCGCGTCC CGGCCGGGCA GGTGTTCTCG CAGGTGGAGC ACCCGCGCGG TGTCATCGGG GTCCACCTCG TGTCCGACGG CGGCACACGG CCGTACCGCG CACACTTCCG CGACCCGTCG TTCAACAACC TGCAGGCGCT CGCCGCGATG TGCGAGGGCG GCCAGGTGGC CGACGTCGTC GTCGCCGTGG CCTCGCTCGA TCCGGTGCTG GGAGGAGTCG ACCGATGA
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Protein sequence | MSTQTSPPTP TDDDVPEFTA SGGDWAQIAE EAARLGEERI VVNMGPQHPS THGVLRLVLE IDGESVVEAR AGIGYLHTGI EKNMEFRTWT QGVTFCTRMD YVAPLFQEAA YCLGVEKLLG VEVPERATLI RVLLMELNRI SSHLVAIATG GNELGATTIM TIGFREREEI LRIFELITGL RMNHAYIRPG GVAQDIPPGT TDTVRDALPR IERGLDELAK LMLANPIFKA RQVGVGYLSL SAAMALGVTG PVLRSAGLPF DLRKAQPYCG YETYDFDVPT STDSDAYSRI VLRLDEARES IKIVRQVLER LDAQDRTGSH PVMVADKKIA WPAQLALGPD GQGNSAEHIR TIMGTSMEAL IHHFKLVTEG FRVPAGQVFS QVEHPRGVIG VHLVSDGGTR PYRAHFRDPS FNNLQALAAM CEGGQVADVV VAVASLDPVL GGVDR
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