Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3215 |
Symbol | |
ID | 7857972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3570066 |
End bp | 3571070 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867316 |
Product | Polyprenyl synthetase |
Protein accession | YP_002883221 |
Protein GI | 229821695 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.119356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACCG CACCGCTACC GCTCGGCGAC GCCGCGCTCG AACGGGTCGT CGCCGACGGC CTGGTCGAGG TCGAGCGACG CCTGGCCGCC GCTGTGAGCA GTACCGAGAT CCTGGCCGAC GCCCCGTCGC GCCACCTGGT CAACGCCGGC GGGAAGCGGA TGCGCCCGGC GCTGGCCCTG CTGACCGCGC AGCTCGGGAG CGGGACGTCG GACGCCGTGC TCGAGGCGGC CGTCGCCGTC GAGCTCACGC ACCTCGCGAC CCTGTACCAC GACGACGTCA TGGACTCCGC CCCCACGCGT CGAGGCGCGC CCAGCGCCCA CGAGGTGTGG GGGAACTCGG TGGCGATCCT CACGGGCGAC CTGCTCTTCG CGCGGGCGTC CCGGCTGGTG TCCGAGCTCG GCCCGGACGC CGTCCGGGTG CAGGCCGAGA CGTTCGAGCG GCTCTGCCTC GGCCAGCTGC ACGAGACGAT CGGGCCGCAG GACGGCGAGG ACGCCGTCGA GCACTACCTC GACGTCCTCG CGGGCAAGAC GGGGTCGCTC ATCGCCGCCT CCGCGCAGTA CGGCGCGATG TTCTCGGGGG TGGGCGCGGA CGCGCTCGGC ACCGTCGTGA GGTACGGCGA GAAGGTCGGC GTCGCGTTCC AGCTCGCCGA CGACGTCATC GACCTCCTCT CGGACGCCGA CGTGACCGGC AAGACTCCGG GCACCGACCT GCGCGAGGGC GTCGCCACGA TGCCGGTGCT GCTGCTGCGC GCCCGCGCGG ACCGGGGCGC CGTCGACGAC GCGGGTCGGG CGGTCCTGGA GCGCCTCGAC GGCGACCTGT CCGACGACGC CGCGCTCGAC GCCGTCCTGG CGGAGCTGCG CGCGCACGAC GTCCTCGACG AGGCGCGCGA CCTCGCGCGG GCGTGGGCGG CCGACGCCGT CGCCGAGCTC GACGGCCTGC CCGACTCGCC CGTGAAGCGC GCGCTCGCCG TCTTCGCCTC GCTCGTCGTC GACCGCCTCG CCTGA
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Protein sequence | MTTAPLPLGD AALERVVADG LVEVERRLAA AVSSTEILAD APSRHLVNAG GKRMRPALAL LTAQLGSGTS DAVLEAAVAV ELTHLATLYH DDVMDSAPTR RGAPSAHEVW GNSVAILTGD LLFARASRLV SELGPDAVRV QAETFERLCL GQLHETIGPQ DGEDAVEHYL DVLAGKTGSL IAASAQYGAM FSGVGADALG TVVRYGEKVG VAFQLADDVI DLLSDADVTG KTPGTDLREG VATMPVLLLR ARADRGAVDD AGRAVLERLD GDLSDDAALD AVLAELRAHD VLDEARDLAR AWAADAVAEL DGLPDSPVKR ALAVFASLVV DRLA
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