Gene Bcav_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3060 
Symbol 
ID7858520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3413827 
End bp3415029 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content75% 
IMG OID643867157 
Producthypothetical protein 
Protein accessionYP_002883066 
Protein GI229821540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.849253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCCGG AGTCGTTCGC CCAGCTGCTC ACCCCGCCGG GGTGGGCGCT GCTCGACGGC 
CTCCCCCCGT ACGACGAGGG GACGGCCATG CACCTCGGTG AGGCCCTCCG CGCGCAAGGG
CTCGACCCCG GGCTCGTCGC CGCGGCGCTC ACGCAGTCGC GGCTGCGCGC CAGGGCGACG
AGCAAGTTCG GGGAGTTCGC GTCGTCGATG CTCTTCACGC CGGACGGCCT CGAGCAGGCG
ACGCGGCTGT CCGTGGCGGT GCGGCACGCG CGGCGGTACC TCGACGCCGG ACTGTCGTAC
GTCGCCGACC TGGGCTGCGG GATCGGGGGC GACGCGATGG CACTCGCCGG GCTCGAGCTC
CGCGTGCTCG CCGTCGAGGC CGACGAGATG ACGGCGGCGA TCGCCACGGT GAACCTGCGG
CAGCTCCCGG AGGCCGAGGT GCGTCACGGC GACGCGTTCG AGGCGGACCT CTCGGGCGTC
GACGGCATCT GGGCCGACCC CGCCCGGCGC ACCTCCGCCG GCGCGCGGCT GCGGGATCTC
CGCTCCTACT CGCCGTCGGT CGAACGCCTG CTCGCCCTGC GCGAGAGCGT GCCGGCGCTC
GGCCTCAAGC TCGGCCCCGC GATCGCTCAC GGCGACGTCC CGGACGACGC CCACGCCCAG
TGGGTCAGCG TCGACGGCAC CGTGCTGGAG GCCGACCTGT GGTTCGGTCC GCTCGCCCCT
GAGGGGCCCG GGCGCAGCGC GCTCGTGGTG ACCGGCGACG ACGCGGCCGT CCTCGCCCAG
GAGGGGACGC CGTCGTCGCC GGTCGTCACG GCGCCGAGCG GGCCGGTCGC CGAGTACCTC
TACGAGCCGG ACGGCGCCGT GATCCGTGCG GGCCTCGTCG CCGACCTCGC GCGCGACCTG
GACGGGCACC TCCTCGACCC GCGGATCGCC TACGTGACGA CGTCGCTGGC CCACCCGACG
CCGTTCGCGC ACGGCTTCCG GGTGCTCGAC GAGTTCGCGT TCTCGCTCAA GCGGCTGCGG
GCCTACCTGC GGGAGCGCGA CGTCGGCACG CTGGAGATCA AGAAGCGTGG CACGGCCGTC
GTCCCCGAAC AGCTGCGCTC CCAGCTGCAG CTGCGCGGAC GCGCCTCCGC GACGGTGGCT
CTCACGCGGA TCGGCGGCGC GCCGCGTGTC CTCGTGCTCG AACGACTCGG CCGGGACGGC
TGA
 
Protein sequence
MDPESFAQLL TPPGWALLDG LPPYDEGTAM HLGEALRAQG LDPGLVAAAL TQSRLRARAT 
SKFGEFASSM LFTPDGLEQA TRLSVAVRHA RRYLDAGLSY VADLGCGIGG DAMALAGLEL
RVLAVEADEM TAAIATVNLR QLPEAEVRHG DAFEADLSGV DGIWADPARR TSAGARLRDL
RSYSPSVERL LALRESVPAL GLKLGPAIAH GDVPDDAHAQ WVSVDGTVLE ADLWFGPLAP
EGPGRSALVV TGDDAAVLAQ EGTPSSPVVT APSGPVAEYL YEPDGAVIRA GLVADLARDL
DGHLLDPRIA YVTTSLAHPT PFAHGFRVLD EFAFSLKRLR AYLRERDVGT LEIKKRGTAV
VPEQLRSQLQ LRGRASATVA LTRIGGAPRV LVLERLGRDG