| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3043 |
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| Symbol | |
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| ID | 7858503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3394777 |
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| End bp | 3396546 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643867140 |
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| Product | Glycoside hydrolase, family 20, catalytic core |
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| Protein accession | YP_002883049 |
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| Protein GI | 229821523 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00805232 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAGCAG GACTGAACTC CCTCTTCCCC CGTCCGCGCA GCATCACGTC GCTCGACGGC
GACGACGTCC CCGCCGGCGT CGTCGCCGTC GAGACGCCCG ACGCGTCGCT GCCCCCGCAG
GGCTACGTCC TGCGCGTGGC CGACGGCGAG GTGCGGCTCG CGTACGCCGA CGACGCCGGA
CGGCGGTACG GCCGGGCGAC GCTCGCCCAG CTCGCCGCGG GCGGCGAAGC CCTTCCCGCC
GTCGAGATCA CCGACTGGCC GGACCTCCCG GACCGCGGGT TCATGCTCGA CGTCAGCCGC
GACCGCGTCC CCACCCGGGA GACGCTGACC CGGATCCTGG ACCTGCTCGA GGCGGCGCGG
TACACGCAGC TCCAGCTGTA CACGGAGCAC ACGTTCGCGT ACGCGGGGCA CGAGGAGGTG
TGGGCCGACG CGTCGCCTCT GACGCCCGAC GACGTCCGGT GGCTCGACGC CTCCTGCGCC
GCGCGCGGGA TCGAGCTCGT GCCGAACCAG AACGTGTTCG GGCACATGGA GCGGTGGCTC
GCCCACGACA CCTACGCCGA CCGCGCCGAG TCCCCGGGCG GGTACACGCT CGCGGGGTCG
GTCCGGAAGC CGGCGGTGCT GGAGCCGACG GCGGACAACG CGGCGTTCGC GCTCGGCCTG
CTGGAGGAGC TGCTGCCGAA CTTCTCCTCC CGGCGCGTCA ACATCGGCGC CGACGAGACG
TTCGAGCTCG GCCTCGGGCG TTCGCGGGAC CGCGTGGCCG CCGAGGGGCG CGGTGCGGTG
TACGTGGAGT ACGTGCAGCG CATCCTGGGC CCGCTCGTCG AGCGCGGGTA CGAGGTGCAG
TACTGGGCCG ATGTGCTCGC CCACCACCCG GAGTACGCGG CCGCCCTGGG CGGCGTGCCG
ATCGTGTGGC TGTACGACTC GCCGTCCGCG ATCGAGCGGG CGCTCGACCT GCCCGCCGCG
ACCAAGGAGC GGATGGCCGC GTTCGACGCC TCCCCCGAGC AACAGCTCGG AGGGTTCGCG
ACTCGCGGCG CCGCCGTCAT CGCGGCCGGC ATCCCGTTCT GGGTGGCGCC CGGCACGGGC
ACCTGGCAGT CCATCGTGGG ACGGCTGGAC AACGCGCGCG AGAACATCCT CGACGCCGCG
ACCACGGCGC TCGCGCACGG CGGCACGGGC TTCCTGCTCA CCCAGTGGGG CGACCACGGG
ATGGTCGAGC CGCCGCCGGT CGCGTTCGCA CCGCTGCTGT ACGGGGGCGC CGTCGCGTGG
TGCTCCGCGG CGAACGCCGA CCTCGACCTG GCGACGACGA CGGCGGAGCT CGCCTTCGGC
GACGCGACGC ACCGCACGGG CGACGCGCTC GTCCGGCTCG GGACGCTCGG CACCGACCTG
GGGATGCCGG CGCTCAACGC GACGCTGCTG TTCGCGTCGC TGTTCCCGGG TCGCTCCGGG
ATGGTGACGA CCGACGGGTT GACGGCCGAC GCCGTCGAGC GCGTGCTCGG CACGATCGAC
GCGCAGCTCG CGAGCCTCGA CCTCGCGACG CCGCAGGGCC CCGACGCCGA CCTGGTGCTC
GCGGAGCTCC AGCACGCCGC GCGGCTCGCC CGGTTCGGGG CGCGGGTGCT GCTCGCGGAC
GTCGGTGGCG GTGCGCTGCC GTCGGTGGCG GAGCTCGACG ACCTGCTCGT GACCCAGCGG
GAGCTGTGGC TGGCGCGCTC GCGGCCCGGT GGGCTCTCCG ACTCCCTCGC GAAGTTCGGG
CCGCTGCGGG AGAAGCTCGC CGCCGGCTGA
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| Protein sequence | MAAGLNSLFP RPRSITSLDG DDVPAGVVAV ETPDASLPPQ GYVLRVADGE VRLAYADDAG
RRYGRATLAQ LAAGGEALPA VEITDWPDLP DRGFMLDVSR DRVPTRETLT RILDLLEAAR
YTQLQLYTEH TFAYAGHEEV WADASPLTPD DVRWLDASCA ARGIELVPNQ NVFGHMERWL
AHDTYADRAE SPGGYTLAGS VRKPAVLEPT ADNAAFALGL LEELLPNFSS RRVNIGADET
FELGLGRSRD RVAAEGRGAV YVEYVQRILG PLVERGYEVQ YWADVLAHHP EYAAALGGVP
IVWLYDSPSA IERALDLPAA TKERMAAFDA SPEQQLGGFA TRGAAVIAAG IPFWVAPGTG
TWQSIVGRLD NARENILDAA TTALAHGGTG FLLTQWGDHG MVEPPPVAFA PLLYGGAVAW
CSAANADLDL ATTTAELAFG DATHRTGDAL VRLGTLGTDL GMPALNATLL FASLFPGRSG
MVTTDGLTAD AVERVLGTID AQLASLDLAT PQGPDADLVL AELQHAARLA RFGARVLLAD
VGGGALPSVA ELDDLLVTQR ELWLARSRPG GLSDSLAKFG PLREKLAAG
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