Gene Bcav_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2956 
Symbol 
ID7861375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3297958 
End bp3298527 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content73% 
IMG OID643867054 
ProductPhosphoesterase HXTX 
Protein accessionYP_002882963 
Protein GI229821437 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000421427 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000365932 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACGA TGGCCGACCT GATGGCGATG CCTGGACCGG GGCAGACCTG CCTCGGGGTC 
GCGGTCGAGA TCCCGCCGCC GTACGCGGGG CCGTTGACGG CCGCCCGCGA GGAGTTCGGC
GACCCGATGG CGCACGCCAT CCCGCCGCAC GTGACGCTGC TCCCGCCCAC GGTGGTCGAC
GACGCCGTCC TGCCGGCGGT CACCGAGCAG CTCGACCGCG TCGCTGCCGC GCAGGAGCCG
TTCGTCATGC GGCTCGCCGG GACGTCCACC TTCCGACCGG TCACCCAGGT GGTGTTCGTG
TCGGTGGCCG ACGGCGCGCC GGAGTGCCGC GAGCTTCAGG AGGCGGTCCG CACCGGACCC
CTCGAGCAGG AGCTCCGCTT CGACTACCAC CCGCACGTAA CGGTCGCGCA CGACCTCCCG
GCCGGCGTGC TCGACCGGGC CGAGACCGAG CTCGCCGACT TCTCCGCGAC GTTCGGTGTC
GGCGAGTTCG CGCTGTTCGA GCTGTGCGCC GACGGCGTGT GGCGGGTGCT GCAGGCGTTC
GCCCTGCGGT CGCACCAGGC CATCGCCTGA
 
Protein sequence
MSTMADLMAM PGPGQTCLGV AVEIPPPYAG PLTAAREEFG DPMAHAIPPH VTLLPPTVVD 
DAVLPAVTEQ LDRVAAAQEP FVMRLAGTST FRPVTQVVFV SVADGAPECR ELQEAVRTGP
LEQELRFDYH PHVTVAHDLP AGVLDRAETE LADFSATFGV GEFALFELCA DGVWRVLQAF
ALRSHQAIA