| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2906 |
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| Symbol | |
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| ID | 7861325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3247083 |
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| End bp | 3248825 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643867004 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002882913 |
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| Protein GI | 229821387 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.109647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0319013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CCACCACGGC ACCCGTGCCC TCCCCCACCG ACGACGCCGG CGACGTCGAC
GCCGCGTCCC TGGACGCCGT CGTCGAGGAG ACGATCGAGG CGGCGGAGGT CGACGCCGCC
CCGCACGCCA CCGACGAGCG CACGTTCGCC GACTTCGGCG TGTCCGACGC GATCGTGACG
GCGCTGCGCG ACGTCGGGAT CGTCCACCCG TTCCCGATCC AGTCGCTGAC CCTCCCGGTC
GCGCTCCAGG CGCACGACAT CATCGGCCAG GCCAAGACCG GCACGGGCAA GACGCTCGGC
TTCGGCATCC CGCTGCTCGA GCGCGTGGTG GGGCCGGGCG AGGACGGCTG GGACGCCGTC
GAGGCGCCCG GCGCTCCGCA GGCGCTCGTC GTCGTCCCCA CGCGCGAGCT CGCTGTCCAG
GTGGCCGGCG ACCTCGAGAC GGCGGCGCGG CACCGCAAGG CGCGCGTCGT CCAGCTGTAC
GGCGGCCGTG CCTACGAGCC GCAGGTCGCG GCGCTCGGAC GCGGCACGGA GGTCGTGGTC
GGCACGCCCG GCCGCATGAT CGACCTGATG CGGCAGCGCG TGCTGGACCT CAGCCACGTC
CGCACCGTCG TGCTCGACGA GGCCGACGAG ATGCTCGACC TCGGGTTCCT GCCCGACGTC
GAGACCCTCC TCGCCGCGAC GCCGCCCCAG CGGCACACGA TGCTCTTCTC CGCGACGATG
CCCGGCGCCG TCGTCGCCCT CGCACGGCGC TTCATGTCGC ACCCCACGCA CATCCGCGCG
CACGACCCGA ACGACGACGG CGCGACCCTC AAGGCGATCC GCAAGGTCGT GTACCGGGCG
CACGCCCTCG ACAAGGTCGA GATGCTCGCC CGCCTGCTGC AGGCCGACGG GCGCGGGCTC
ACGATCGTGT TCACGCGCAC GAAGCGGACG GCGGCGAAGG TCGCCGACGA GCTCGTCGAC
CGTGGGTTCG CCGCTGCCGC GATCCACGGC GACCTCGGCC AGGGTGCCCG TGAGCAGGCG
CTGCGCGCCT TCCGCCACGG CAAGGTCGAC GTCCTCGTCG CGACGGACGT CGCGGCCCGC
GGTATCGACA TCGACGACGT CACGCACGTC GTCAACTACC AGTGCCCCGA GGACGAGAAG
ACGTTCCTGC ACCGGATCGG CCGTACGGGC CGCGCCGGCA ACACGGGCAC GGCCGTGACG
TTCGTGGACT GGGACGACAT CCCGCGCTGG GCGCTCATCG ACCGCGCGCT CGAGCTCGGC
ACGCCGAACC CGCCGGAGAC GTACTCGACG TCGCCGCACT TCTACTCCGA CCTCGGCATC
CCCGAGGGCA CGAAGGGCCG GCTCCCGCGC GGCGCCCGCA CCCGCGCCGG CCTCGAGGCC
GAGGAGCTCG AGGACATCGG CGAGACCGGG AAGCACCACG GGACGCCGAC GGCGCGCGGT
GGCCGGGACG GCGAGCGGCG CGGCCGGGAC GGCGAGCGGC GCGGCCGCGA CGGCGACCGG
CACGACCGGC CCGCCGGGGG CGACGGTCCG CGCGGCGAGG GTGGTCGACG ACGGCGCCCG
CGTCGCACCG CGTCCGAGGC GCCCGCCGAC GGTCAGGCGC GTCGCTCCGA CGAACGTCCC
GCCGGCGAGC AGCCGCGGCC CGACGGCGAG CAGCCGCGGC GTCGTCGCCG TCGTCGTCGC
GGTGGTGCCG GCGACGGCAC GGCCCCGGCA GCACCGGCCG ACGGCGGGTC CCCGACGCCC
TGA
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| Protein sequence | MTDTTTAPVP SPTDDAGDVD AASLDAVVEE TIEAAEVDAA PHATDERTFA DFGVSDAIVT
ALRDVGIVHP FPIQSLTLPV ALQAHDIIGQ AKTGTGKTLG FGIPLLERVV GPGEDGWDAV
EAPGAPQALV VVPTRELAVQ VAGDLETAAR HRKARVVQLY GGRAYEPQVA ALGRGTEVVV
GTPGRMIDLM RQRVLDLSHV RTVVLDEADE MLDLGFLPDV ETLLAATPPQ RHTMLFSATM
PGAVVALARR FMSHPTHIRA HDPNDDGATL KAIRKVVYRA HALDKVEMLA RLLQADGRGL
TIVFTRTKRT AAKVADELVD RGFAAAAIHG DLGQGAREQA LRAFRHGKVD VLVATDVAAR
GIDIDDVTHV VNYQCPEDEK TFLHRIGRTG RAGNTGTAVT FVDWDDIPRW ALIDRALELG
TPNPPETYST SPHFYSDLGI PEGTKGRLPR GARTRAGLEA EELEDIGETG KHHGTPTARG
GRDGERRGRD GERRGRDGDR HDRPAGGDGP RGEGGRRRRP RRTASEAPAD GQARRSDERP
AGEQPRPDGE QPRRRRRRRR GGAGDGTAPA APADGGSPTP
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