| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2743 |
|---|
| Symbol | |
|---|
| ID | 7860181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3046986 |
|---|
| End bp | 3048842 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866840 |
|---|
| Product | type III restriction protein res subunit |
|---|
| Protein accession | YP_002882750 |
|---|
| Protein GI | 229821224 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.100626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTCGG CGGCTCCTGA GCCGCAGCCC GACCTCTTCA GCGATCTGAG CGCTCTCGAC
GACGACGTCG AGGGCGGGCA GTCGCGTGCG GTCGGGCGCG GCACGAGCAC CTCCGCCTCG
ACGACGGCAG CCGAGCACCT GTCGCCGGCG TTCCCGGCGC GGGCGGCGTG GGGCACGGCG
CCCGCGTTGC GAGCGTGGCA GCAGGCCGCC GTCGACGACT ACCTCGCCAG GTCGCCCCGC
GACTACCTCG CGGTGGCGAC GCCGGGAGCC GGCAAGACGA CGTTCGCGCT GCGCGTCGCC
ACGGAGCTCC TCGAGGCGGG CCTGGTGCGC CGGGTGACTG TCGTCGCGCC CACGGAGCAC
CTCAAGGTGC AGTGGGCGGA GGCGGCGGCG CGGGTCGGCG TCCGGATCGA TCCGAGCTTC
CGCAACGCCC AGGGCCGGCA CGGTGCGCAG TTCGACGGCG TCGCGCTCAC GTACGCGCAG
GTGGCTGCGA ACCCGGCGCT GCACCGGGCG CGCACGCAGG CAGGGCCGAC GCTCGTCATC
CTCGACGAGG TGCACCACGC CGGCGACGCG CTGAGCTGGG GCGACGCCGT CGTCGAGGCG
TTCGAGCCCG CCCGCCGACG CCTGTCGCTC ACCGGGACGC CGTTCCGCTC GGACACGGCC
GCCATCCCGT TCATCACGTA CAGCGCCGAC GGCGAGGGGA TCCGGCGGTC CCGCGCCGAC
CACGCCTACT CCTACGGTGA CGCGTTGGCG GACGGCGTCG TGCGGCCCGT GCTGTTCATG
GCGTACTCGG GCCAGATGCG GTGGCGGTCG CGGGCCGGCG ACGAGGTCAG CGCCCGGCTC
GGCGAGCCGC TCACGAAGGA CATGATCGCG CAGGCGTGGC GGACGGCGCT CAACCCGAAG
GGCGAGTGGA TCCCCGCCGT CCTCGCCGCC GCGGACACCC GCCTCACCGA GGTGCGGCGC
GGGATGCCGG ACGCCGGCGG GCTCGTGATC GCGACCGACC AGGAGACCGC CCGGGCGTAC
GCGGGCAGGC TGCGGGAGAT CACGGGGGAG TCGGCGGTCG TCGTGCTGTC CGACGACGAC
GACGCCTCGG CGCGCATCGA GGAGTTCACC GCGGGGACGC AGCGCTGGAT GGTGGCGGTG
CGGATGGTCT CGGAGGGCGT CGACGTGCCG CGGCTGGCCG TGGGGGTGTA CGCGACGGCG
ACGGCGACGC CGCTGTTCTT CGCCCAGGCC GTCGGCCGGT TCGTGCGAGC GCGGCGACGC
GGCGAGACGG CGTCCATCTT CCTCCCGAGC GTGCCGACGC TCCTCGGGCT CGCCGGCGAG
CTGGAGATCG AGCGTGACCA CGCGCTGGAC CGCCCGGCGT CGGCCACCGA GGACGGGCTG
GACGATGCCG AGCTCGCCGC CGCGAACCGC GCGGAGAAGG CGAGCTCCGA CCTCACGCAG
CCGGGGTTCG AGGCGCTCGA GGCCCAGGCG TCGTTCGATC GCGTGCTGTT CGACGGCGGC
GAGTTCGGCA CGGGTGGCGA GATCGGCTCC GACGAGGAGG CCGACTTCCT CGGCCTGCCG
GGGCTGCTCG ATGCCGATCA GGTGCGCGAT CTCCTGCGCT CCCGGCAGGC GGAGCACGTG
GCCTCGCGGC GTGCCCGGGG AGCCGAGCCG GCGAGCGATC ACCGCCGGCT CGCAGCGCTC
CGCAAGGAGC TCTCCTCGCT GGTCAGCGCG TGGTCGCGCC GCAGCGGCGT GCCGCACGGC
GTCGTCCACA CGCGGCTGCG CGAGAGGTCC GGCGGGCCGG AGGTGCCGCT GGCAAGCGCG
GATCAGCTTC AGGCCAGGAT CGACGCCGTG CGCGGGTGGT TCGTCGGGCG CACGTAG
|
|---|
| Protein sequence | MSSAAPEPQP DLFSDLSALD DDVEGGQSRA VGRGTSTSAS TTAAEHLSPA FPARAAWGTA
PALRAWQQAA VDDYLARSPR DYLAVATPGA GKTTFALRVA TELLEAGLVR RVTVVAPTEH
LKVQWAEAAA RVGVRIDPSF RNAQGRHGAQ FDGVALTYAQ VAANPALHRA RTQAGPTLVI
LDEVHHAGDA LSWGDAVVEA FEPARRRLSL TGTPFRSDTA AIPFITYSAD GEGIRRSRAD
HAYSYGDALA DGVVRPVLFM AYSGQMRWRS RAGDEVSARL GEPLTKDMIA QAWRTALNPK
GEWIPAVLAA ADTRLTEVRR GMPDAGGLVI ATDQETARAY AGRLREITGE SAVVVLSDDD
DASARIEEFT AGTQRWMVAV RMVSEGVDVP RLAVGVYATA TATPLFFAQA VGRFVRARRR
GETASIFLPS VPTLLGLAGE LEIERDHALD RPASATEDGL DDAELAAANR AEKASSDLTQ
PGFEALEAQA SFDRVLFDGG EFGTGGEIGS DEEADFLGLP GLLDADQVRD LLRSRQAEHV
ASRRARGAEP ASDHRRLAAL RKELSSLVSA WSRRSGVPHG VVHTRLRERS GGPEVPLASA
DQLQARIDAV RGWFVGRT
|
|---|
| |