| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2640 |
|---|
| Symbol | |
|---|
| ID | 7861522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2936704 |
|---|
| End bp | 2938356 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643866733 |
|---|
| Product | GTP-binding protein HSR1-related protein |
|---|
| Protein accession | YP_002882647 |
|---|
| Protein GI | 229821121 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.133942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.721182 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTCG CACTGGCGGA GCGCGTCGCC GCGCTCTCCG AGGCCGCCGA CGCCGGTGCC
GGGCGCCTGC CCGCAGACCT GGTCGACGAC GCGCGCGCCG TGGCGCGCCG GGCACTCGAA
CGCGGCGGCC TGTCCGCCGA GCACACGGTC GTCGCGCTCG CGGGGGCGAC GGGGTCGGGC
AAGTCGTCGG TGCTCAACGC CCTCGTCGGG ACCGAGCTGG CCGCCGTCGG CGTCCAGCGT
CCGACGACGT CGCACGCGCT CGCCGCCGTC TGGGGCGGCG GCGCCGACCC GCTGCTGGAC
TGGCTCGAGG TCCGCCGCCG GCACACCGTG GACGGCGCGC TCGCGGCCGG CCCGCTGAGC
GAGGCGACGG GCCGGTGGCG CCGGCGCCGC TCGGCCAGCG CGCCGGGCGG GCTCGTGCTG
CTCGACCTGC CGGACCACGA CTCGGTCGTC ACCGACCACC GGCTGCGCGC GGAGCGACTC
GTCGAACGGG CGGACCTCCT CGTGTGGGTG GTCGACCCGC AGAAGTACGC GGACGCCGTC
CTGCACGAAC GGTACTTGCA GCCCCTGGCC GGCCACGGCG CCGTCGTCGT CGTCGTGCTC
AACCAGATCG ATCGGCTGTC CGCGCAGGAG CAGGCGGCGT GCCTGGCGGA CCTGCGCCGC
CTCGTCGCGC AGGACGGGCT CGACGGCGCC CGGGTGCTCG GCGTGTCGGC CCGGACCGGT
GCAGGGCTCG ACGACCTGCG CCGCCTGCTC ACGGAGGCGG CGACGCGACG CGAGGCGGCG
ACGGCGCGAC TCGTGGCCGA CGTGCGCTCC GTGGCCGGCC GCATCCGGGA GGAGTGCGGC
GCCGCCCCAC CGCCCGGCGT CCTGGCGCCG TCCGACTCGG CCCAGACCTC CGCCCTTGCG
GATGCCGCGG GGGTCGGCAC GGTCGTCGAC GCCGTCCGGC GCTCCGCCGT GCGCGACGCG
CGGGCGGCGA CCGGGTGGCC GGTGACGCGC TGGGTCGGCC GGTTCCGGCC CGATCCGCTG
CGCCGCCTCG GGCTGCGGCG CGACGCCGCG GCGACCTCGG GCGGGGGCGA CCGGCCCGAC
CTGCGCCGCA CCTCGCTGCC GGCCCCGTCG CCCGCGAGCC GCGCGTCGTC GTCGTCGGCG
ATCCGCGCGT ATGTGCGCGA CGCGACGACG GGCGTCCCCG AGGCGTGGGC GCGCAGCGCG
CGGGAGCGCG TCCAGGGCGG GGAGCCGCTC GCCGACGCGC TGGACGTCGC GGTGGCGGGC
ACGGACCTCG AGGTGGGCCG CCGGCCCCGG TGGTGGCGGG CGGTGGGCGT GGCGCAGTGG
GTGGTGCTGG CCGCCGGGAT CGCCGGCTTG CTGTGGCTCG GCGTCCTCGC CGGTCTCGCG
TACCTCCGCC TGCCCGAGCC GCCGACGCCC ACGTGGGAGG GCTGGCCCTG GCCGACGCTG
GCGGTGCTCG GCGCCGTCGT GCTCGGCATC CTGCTCGCCC TGGCCGCCCG AGCCGGCGCG
GCGATCGGCG GACGCCGACG CGCGGAGCGG GTCCGGCGCC GGCTGCACAG GGCTGTCGAC
GCCGTCGCCG AGTCGCGTGT GCGCGGCCCG GTGCGCGAGG AGCTGGCCGC GCTGGAGGAG
TGCCGTGGCG CCGCGCTCCG GGCCGCGGGC TGA
|
|---|
| Protein sequence | MSVALAERVA ALSEAADAGA GRLPADLVDD ARAVARRALE RGGLSAEHTV VALAGATGSG
KSSVLNALVG TELAAVGVQR PTTSHALAAV WGGGADPLLD WLEVRRRHTV DGALAAGPLS
EATGRWRRRR SASAPGGLVL LDLPDHDSVV TDHRLRAERL VERADLLVWV VDPQKYADAV
LHERYLQPLA GHGAVVVVVL NQIDRLSAQE QAACLADLRR LVAQDGLDGA RVLGVSARTG
AGLDDLRRLL TEAATRREAA TARLVADVRS VAGRIREECG AAPPPGVLAP SDSAQTSALA
DAAGVGTVVD AVRRSAVRDA RAATGWPVTR WVGRFRPDPL RRLGLRRDAA ATSGGGDRPD
LRRTSLPAPS PASRASSSSA IRAYVRDATT GVPEAWARSA RERVQGGEPL ADALDVAVAG
TDLEVGRRPR WWRAVGVAQW VVLAAGIAGL LWLGVLAGLA YLRLPEPPTP TWEGWPWPTL
AVLGAVVLGI LLALAARAGA AIGGRRRAER VRRRLHRAVD AVAESRVRGP VREELAALEE
CRGAALRAAG
|
|---|
| |