Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2332 |
Symbol | |
ID | 7861944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2614436 |
End bp | 2616298 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643866425 |
Product | HNH endonuclease |
Protein accession | YP_002882345 |
Protein GI | 229820819 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.934407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.611085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCAG AGGTGGTGCC GGATGTGCTG CGTACCGCTG CCTCCCCGGC GAACGGGCCG CGTTCCTCGC GCGCCCTGCA CGCTGTCGCT CCGGCGCGGA TGACGTCACC GCGCGGCTCG GGCGTTCTTC GTTCCTCGGG CTCCCCGAGC TCCGCCGACC CGTCCGGTTC GGCGGCGTCG GCGTCGGCGT CGACGTCGAC GGGCGATCCG GACGTCGTGT CGAACGCCCG CGCGGTGCTC CTCGCCGTCG AGGCGCTCGG CGTCGCGGTC AGCGACGTCC GCTCCGGCCG AGAAGTCGCC GAGGAAGCTG CTCTCCGCGA GGCGGTCGCG GTGCTCGACC GCGCAGAGGC TCTCATCCGC GTGAACCGTG GCCACGTGCT GGGCGTCATC CGCGAGGAAG GGCGGTGGGC GGTCGACGGC GACCGTGACT TCGCCGGCTG GCGGGCCCGC ACGTCCGGGC AGGGGCGCGG TGCGGCGCGT CGGGAGGCGA CGCTCGCCGA CGGGCTTGAC GCCCTGCCCG GGACGGCGGA GGCCGTTGCC ACGGGTGAGG TGAGTCTCGG GCACGCGGAC GTCCTGACGT CCCTCCTCGC GGAGGCGTCG CCTGCTGTGA AGGAACGGCT GGCGTCGGGC GGGGAGAGCG AGCTCCTGCC GACGGCGGTG CAGACCGACG TGCCGACGTT CCGGAAGAAG GCACAAGCGT GGGCGGGGCG GATCGACGCC GATCAGGCGG ACCGCGACGC GGAGAGCGTG CGTGCCCGCC GGTTCCTCCG GATCACGGGC GGGAACCGGG GCACCCGGAT CGAAGGCCTC CTGGACCCGC TTGCCGGCGC GACACTGCGA ACCGCTCTCG AAGCACTGAC GCCCGCACCC GCAGCGTCGG ACCTGCGCAC CCCGGATCAG CGGCGCGCGG ACGCCCTTGT CGACCTCGCC GGGCGGGTCC TGGCGTCCGG GACCGAGAAG CCGGGGGCGC AGGTTCGGCC TCACCTCAAC CTGCTCGTCC CGTATGACAC GTGGCTGCTC TTGCGCCGCC GTCCGACGTC CACCTGCGCA GGCGAGGCCG CGGGCGATCC GACCGTGGGC GACGTTGCCA TGGGCGGCGA GGCCGTGGGC GGCGAGGCCG TGGGCGGCGA GGCCGTGGGC GACGTCGCCG TGGGCGACGT CGCCGTGGGC GCGGCACCTG GCGTGCGATC CGGCTCCCGC GGCTCCGGCT CAGCGGACGA GGTCCCGCTC GCCGAGCTGG AGGACGGCAC ACTCGTCCCG TTCGGCGTCC TGGAGACGCT CGCGTGCGAC TGCGAGATGA CCCGGATCGT GCTCGACGCG GACGGCGTCC CTCTCGACGT CGGGCAGACA CAACGCTCGT ACACCAGGGA GCTGCGGCGA GCGGCCCTGG CGCGGGACCG GCACTGCCGC TGGCCCGGTT GCTCGATCCG TGCCTCCTGG TGCGAGGTGC ACCACCGGAT CTGGTACTCG CACGGAGGCG CGACCTCGCT CGAGAACGCG ATCACGCTGT GCGTCTTCCA CCACCACGAG GTCCACCGAC GTCACCTCGG CATCGACGTC ATACCCGGCG GCCACCACTT TCGACGGCGC GACGGCTCCA CCCTAGGCAC CAGCACCCGC CTCCAGGACG ACCTCCTCGT GCCCGCGATG CGACCTACGG TGGCGGCGCC TTCCGCCGTG GTCGAGAACG TTGTGCCGGA ACGGCAGGAT CGGTCAGCTT CTGGTTCGGC GGAGCCACTC GGATCGGATC CACCGCGGAG ACCAGAAGCC GACTTGTCCG GGGCTTCTCC GCCGGGCGGA CTCACGTCAC CTCCGGCGGC GGCACCAGGG CTGTGGAACT CGGACGAGCC GCCGCCGTGG TGA
|
Protein sequence | MSAEVVPDVL RTAASPANGP RSSRALHAVA PARMTSPRGS GVLRSSGSPS SADPSGSAAS ASASTSTGDP DVVSNARAVL LAVEALGVAV SDVRSGREVA EEAALREAVA VLDRAEALIR VNRGHVLGVI REEGRWAVDG DRDFAGWRAR TSGQGRGAAR REATLADGLD ALPGTAEAVA TGEVSLGHAD VLTSLLAEAS PAVKERLASG GESELLPTAV QTDVPTFRKK AQAWAGRIDA DQADRDAESV RARRFLRITG GNRGTRIEGL LDPLAGATLR TALEALTPAP AASDLRTPDQ RRADALVDLA GRVLASGTEK PGAQVRPHLN LLVPYDTWLL LRRRPTSTCA GEAAGDPTVG DVAMGGEAVG GEAVGGEAVG DVAVGDVAVG AAPGVRSGSR GSGSADEVPL AELEDGTLVP FGVLETLACD CEMTRIVLDA DGVPLDVGQT QRSYTRELRR AALARDRHCR WPGCSIRASW CEVHHRIWYS HGGATSLENA ITLCVFHHHE VHRRHLGIDV IPGGHHFRRR DGSTLGTSTR LQDDLLVPAM RPTVAAPSAV VENVVPERQD RSASGSAEPL GSDPPRRPEA DLSGASPPGG LTSPPAAAPG LWNSDEPPPW
|
| |