Gene Bcav_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2332 
Symbol 
ID7861944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2614436 
End bp2616298 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content73% 
IMG OID643866425 
ProductHNH endonuclease 
Protein accessionYP_002882345 
Protein GI229820819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.934407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.611085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAG AGGTGGTGCC GGATGTGCTG CGTACCGCTG CCTCCCCGGC GAACGGGCCG 
CGTTCCTCGC GCGCCCTGCA CGCTGTCGCT CCGGCGCGGA TGACGTCACC GCGCGGCTCG
GGCGTTCTTC GTTCCTCGGG CTCCCCGAGC TCCGCCGACC CGTCCGGTTC GGCGGCGTCG
GCGTCGGCGT CGACGTCGAC GGGCGATCCG GACGTCGTGT CGAACGCCCG CGCGGTGCTC
CTCGCCGTCG AGGCGCTCGG CGTCGCGGTC AGCGACGTCC GCTCCGGCCG AGAAGTCGCC
GAGGAAGCTG CTCTCCGCGA GGCGGTCGCG GTGCTCGACC GCGCAGAGGC TCTCATCCGC
GTGAACCGTG GCCACGTGCT GGGCGTCATC CGCGAGGAAG GGCGGTGGGC GGTCGACGGC
GACCGTGACT TCGCCGGCTG GCGGGCCCGC ACGTCCGGGC AGGGGCGCGG TGCGGCGCGT
CGGGAGGCGA CGCTCGCCGA CGGGCTTGAC GCCCTGCCCG GGACGGCGGA GGCCGTTGCC
ACGGGTGAGG TGAGTCTCGG GCACGCGGAC GTCCTGACGT CCCTCCTCGC GGAGGCGTCG
CCTGCTGTGA AGGAACGGCT GGCGTCGGGC GGGGAGAGCG AGCTCCTGCC GACGGCGGTG
CAGACCGACG TGCCGACGTT CCGGAAGAAG GCACAAGCGT GGGCGGGGCG GATCGACGCC
GATCAGGCGG ACCGCGACGC GGAGAGCGTG CGTGCCCGCC GGTTCCTCCG GATCACGGGC
GGGAACCGGG GCACCCGGAT CGAAGGCCTC CTGGACCCGC TTGCCGGCGC GACACTGCGA
ACCGCTCTCG AAGCACTGAC GCCCGCACCC GCAGCGTCGG ACCTGCGCAC CCCGGATCAG
CGGCGCGCGG ACGCCCTTGT CGACCTCGCC GGGCGGGTCC TGGCGTCCGG GACCGAGAAG
CCGGGGGCGC AGGTTCGGCC TCACCTCAAC CTGCTCGTCC CGTATGACAC GTGGCTGCTC
TTGCGCCGCC GTCCGACGTC CACCTGCGCA GGCGAGGCCG CGGGCGATCC GACCGTGGGC
GACGTTGCCA TGGGCGGCGA GGCCGTGGGC GGCGAGGCCG TGGGCGGCGA GGCCGTGGGC
GACGTCGCCG TGGGCGACGT CGCCGTGGGC GCGGCACCTG GCGTGCGATC CGGCTCCCGC
GGCTCCGGCT CAGCGGACGA GGTCCCGCTC GCCGAGCTGG AGGACGGCAC ACTCGTCCCG
TTCGGCGTCC TGGAGACGCT CGCGTGCGAC TGCGAGATGA CCCGGATCGT GCTCGACGCG
GACGGCGTCC CTCTCGACGT CGGGCAGACA CAACGCTCGT ACACCAGGGA GCTGCGGCGA
GCGGCCCTGG CGCGGGACCG GCACTGCCGC TGGCCCGGTT GCTCGATCCG TGCCTCCTGG
TGCGAGGTGC ACCACCGGAT CTGGTACTCG CACGGAGGCG CGACCTCGCT CGAGAACGCG
ATCACGCTGT GCGTCTTCCA CCACCACGAG GTCCACCGAC GTCACCTCGG CATCGACGTC
ATACCCGGCG GCCACCACTT TCGACGGCGC GACGGCTCCA CCCTAGGCAC CAGCACCCGC
CTCCAGGACG ACCTCCTCGT GCCCGCGATG CGACCTACGG TGGCGGCGCC TTCCGCCGTG
GTCGAGAACG TTGTGCCGGA ACGGCAGGAT CGGTCAGCTT CTGGTTCGGC GGAGCCACTC
GGATCGGATC CACCGCGGAG ACCAGAAGCC GACTTGTCCG GGGCTTCTCC GCCGGGCGGA
CTCACGTCAC CTCCGGCGGC GGCACCAGGG CTGTGGAACT CGGACGAGCC GCCGCCGTGG
TGA
 
Protein sequence
MSAEVVPDVL RTAASPANGP RSSRALHAVA PARMTSPRGS GVLRSSGSPS SADPSGSAAS 
ASASTSTGDP DVVSNARAVL LAVEALGVAV SDVRSGREVA EEAALREAVA VLDRAEALIR
VNRGHVLGVI REEGRWAVDG DRDFAGWRAR TSGQGRGAAR REATLADGLD ALPGTAEAVA
TGEVSLGHAD VLTSLLAEAS PAVKERLASG GESELLPTAV QTDVPTFRKK AQAWAGRIDA
DQADRDAESV RARRFLRITG GNRGTRIEGL LDPLAGATLR TALEALTPAP AASDLRTPDQ
RRADALVDLA GRVLASGTEK PGAQVRPHLN LLVPYDTWLL LRRRPTSTCA GEAAGDPTVG
DVAMGGEAVG GEAVGGEAVG DVAVGDVAVG AAPGVRSGSR GSGSADEVPL AELEDGTLVP
FGVLETLACD CEMTRIVLDA DGVPLDVGQT QRSYTRELRR AALARDRHCR WPGCSIRASW
CEVHHRIWYS HGGATSLENA ITLCVFHHHE VHRRHLGIDV IPGGHHFRRR DGSTLGTSTR
LQDDLLVPAM RPTVAAPSAV VENVVPERQD RSASGSAEPL GSDPPRRPEA DLSGASPPGG
LTSPPAAAPG LWNSDEPPPW