Gene Bcav_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2058 
Symbol 
ID7859338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2338413 
End bp2339423 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content74% 
IMG OID643866152 
Producthypothetical protein 
Protein accessionYP_002882075 
Protein GI229820549 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.160915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.181699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA CGGCGACGGA CCGGCTCACG CGGCTCCTGG CGCTCATCAC GTACGTCGAG 
GACAACCCCG GCGTGCCGGT CGCCCAGGTG GCTGACCACT TCGGCGTGAG CGAGGCGCAG
GTGCTCAGCG ACGTCGACAC GCTGTGGGTC TCCGGCACAC CCGGCTACCT GCCCGACGAC
CTCATCGACT TCGCCGTCGA CTCGTACGAG CAGAACCTGC TGACGCTCAC CGAGTCGCGT
GGCATGGACC GGCCGCTGCG GCTGGGGCCG ACCGAGGCCG TCGCCCTGCT GGTCGCGTTG
CGCGCACTGG CCCGCGTGCC GGGGTTCGCC GGCGACGACG TCGTCGCGTC CGCCCTGGAG
AAGCTCACGT CCGCCGCAGG GGAGGCGGCC TCGGCCGCCG ACGCGATCGA CGTCCGGCTC
GGGACCCCGA ACGGGTACGC CGGCGTGCAG GACACGCTGC GCGTGCTGCG GGGCGCTCTC
GTGGACGGCC GGCGTGTGCA CCTGCGCTAT GTGTCGGCGT CGGACGCGGT CAGCGAGCGG
GACGTCGACC CGCTCCAGAT CGTCAGCGAC GGCGACCGGT GGTTCCTGCG TGCGTGGTGT
CACCGGGCCG GCGACGTACG GCACTTCCGG CTCGACCGCG TGCTCGCCGC CGACGTGCTT
GACGAGCCCG TCGCCGCCCA CCCCGAGGTG GGCGAGGAGC ATGGGGTCGA GCCGTCGCCG
TCGCCGACCG ACACGACCGT CGTGCTCGAG CTCACGGCAC GCAGCCGCTG GGTGGGCGAG
CGGTTCGGTG GCGACGTCAC CGACCTGGGC GACGGCTGGA TCCGCGTGTC CCTGCGCGTC
GCCGATCCGG CATGGCTGGC CGGGCTCGTG CTGGGTCTCG GCGAGGACGT CCGCCGGGTG
TCGCCGCCGG ACGTGGCGCG CAGCATCGCG GGCCGTGCCC GGGCCGCCCT CGAGGCGTAC
GAGAGCCACG GAGCCGCTGT ACCGTCGGGA TCGCCCGACC CGGCTGAGTA G
 
Protein sequence
MAETATDRLT RLLALITYVE DNPGVPVAQV ADHFGVSEAQ VLSDVDTLWV SGTPGYLPDD 
LIDFAVDSYE QNLLTLTESR GMDRPLRLGP TEAVALLVAL RALARVPGFA GDDVVASALE
KLTSAAGEAA SAADAIDVRL GTPNGYAGVQ DTLRVLRGAL VDGRRVHLRY VSASDAVSER
DVDPLQIVSD GDRWFLRAWC HRAGDVRHFR LDRVLAADVL DEPVAAHPEV GEEHGVEPSP
SPTDTTVVLE LTARSRWVGE RFGGDVTDLG DGWIRVSLRV ADPAWLAGLV LGLGEDVRRV
SPPDVARSIA GRARAALEAY ESHGAAVPSG SPDPAE