Gene Bcav_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2025 
Symbol 
ID7858645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2307371 
End bp2308201 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content71% 
IMG OID643866119 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002882042 
Protein GI229820516 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0565493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGTCC AGCCCGTCCC GCCTCCGCTC GACACCCCCC GCACCGGGTA CGCCCCGATC 
GGCGACCTGC GGATGTACTA CGAGATCCAC GGCTCGGGCG GGACGCCGCT CGTGCTGCTG
CACGGGGGAC TGTTCAACAT CGACCTGCAG TTCGGCGAGG TGCTCCCGTA CCTCGCCGCG
AGCCGGCAGG TCATCGCCGT CGACTTCCAG GCCCACGGCC GCACGAACGA CATCGACCGT
CCGCTCACGA CGGAGAACCT CGCCGGCGAC GTCGTCGCGC TGCTGCAGCA CCTCGACGTG
CCGCGCGCTG ACCTGTTCGG CTTCAGCGTC GGCGGCGCCG TCGCGCTACG TCTGGCGATC
ACGCACCCGG AGCTCGTCCG GAAGGCGGTC GTGTCGTCGG TCTCGTTCCA CCCGAGCGGG
GACCGGGGGG AGAACACGGA CGCGGTCGCG GAGCTGGACG TCAGCATGAT CGCCGGCACC
CCGATGGAGC AGGAGTACCT CGCGAAGTCG CCGCACCCGG AGAGGCTCCA GGCGCTGCTG
GACAAGATCG CCGCGTACGA CCACGGGGTA GCGGGCTGGT CCGAGGACGA CATCCGCGGC
TACGCCGCAC CGACGCTCGT CACGGTCGGC GACTGCGACA TGGTCAAGCT CGAGCACGTG
GTGCGGTTCC TCCAGCTGCG CGGCGGCGAC GTCAACGGCG ACTTCGACGG CGTCCCCGCG
TCCCAGCTGG CCGTCTTCCC GGGCAGCACC CACTTCTTCG GGATGGCGCG CACGAACCTC
GTGCAGGACG TCGTGCTGAC GTTCCTCGAC GCGCCGGAGC CCGCGAGCTG A
 
Protein sequence
MSVQPVPPPL DTPRTGYAPI GDLRMYYEIH GSGGTPLVLL HGGLFNIDLQ FGEVLPYLAA 
SRQVIAVDFQ AHGRTNDIDR PLTTENLAGD VVALLQHLDV PRADLFGFSV GGAVALRLAI
THPELVRKAV VSSVSFHPSG DRGENTDAVA ELDVSMIAGT PMEQEYLAKS PHPERLQALL
DKIAAYDHGV AGWSEDDIRG YAAPTLVTVG DCDMVKLEHV VRFLQLRGGD VNGDFDGVPA
SQLAVFPGST HFFGMARTNL VQDVVLTFLD APEPAS