Gene Bcav_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1993 
Symbol 
ID7858613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2270623 
End bp2271225 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content77% 
IMG OID643866087 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_002882010 
Protein GI229820484 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0230385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGC TGGTGCAGGG CCGGGTGGCC GCCATCGGGC TCGACGCCGT CGTCGTGGTC 
GTCGGAGGTG TTGGGATGCG CGTGCTGGCC ACGCCGGCGA CGCTGGCCGG GCTGCGCGTC
GAGGCCGACT GCGAGCTGCA CACGTCGCTC GTCGTCCGGG AGGACTCGCT CACCTTGTTC
GGCTTCGCGG ACGCCGACGA GCGCGACGTG TTCGAGCTCG TGCAGACGGT GTCCGGCGTC
GGCCCGCGTC TCGCGCTGGC GATGCTCGCC GTGCACACGC CGGACGGTCT GCGGCGCGCC
GTCGCCCAGG AGGACCTGGC GGCACTCGTG CGTGTCCCCG GGATCGGCCG GAAGGGCGCG
AGCCGCATCG TCCTCGAGCT GGGCGACCGG CTCGGGCCCG CCCAGGGTGC GGCTCCGGCG
GCTCCTGTGG CCGTGGACGA CGGCGCGGAC GTCGTCGACG CGCTGGTGGG CCTCGGGTGG
CCCGTGCGGC AGGCGCAGGA CGCCGTCCGC GGCGTGCTCG AGGACGCCGA CGGCACGGCC
CCGGACGCGG CGGGCCTGCT CCGGGCCGCG CTGCGGTCGC TCGCCGGGGA CGCCCGTGGC
TGA
 
Protein sequence
MIALVQGRVA AIGLDAVVVV VGGVGMRVLA TPATLAGLRV EADCELHTSL VVREDSLTLF 
GFADADERDV FELVQTVSGV GPRLALAMLA VHTPDGLRRA VAQEDLAALV RVPGIGRKGA
SRIVLELGDR LGPAQGAAPA APVAVDDGAD VVDALVGLGW PVRQAQDAVR GVLEDADGTA
PDAAGLLRAA LRSLAGDARG