Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1980 |
Symbol | |
ID | 7858600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2260705 |
End bp | 2261274 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643866074 |
Product | histidine triad (HIT) protein |
Protein accession | YP_002881997 |
Protein GI | 229820471 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000948071 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCGCACG AGTCGCCTGC GGAGTTCGCG GGCGATCCCG ACGACGTCGC CCGCCTGTGG ACGCCGCACC GGATGGTCTA CATCGGCGGT CAGGACAAGC CGGCCGACAC CAGCGCCGAC GCCTGCCCGT TCTGCCGGAT CCCGGCACGG TCCGACGCCG ACGGCCTCGT GGTCCACCGG GGCAGGACGT GCTACGTCGT CCTCAACCTC TACCCGTACA ACCCGGGGCA CCTCCTGGTG TGCCCGTACC GCCACGTGGC GGACTACCCG GACCTGACGC AGGCGGAGAC GCACGAGCTG GCGGCGCTCA CGGCGACGGC GATGCGGGTC ACGCGTGCCG TGTCCCGGCC CGACGGGTTC AACATCGGGC TCAACCAGGG GGAGGTCGCG GGGGCGGGGA TCGCCGCCCA CCTGCACCAG CACGTGGTCC CGCGGTGGTC CGGGGACTCG AACTTCCTTC CGATCGTCGC CCGCACGAAG GCCCTGCCGC AGCTGCTCGG CGAGACCCGC GAGCTGCTGG CCGGAGCCTG GCCGCAGGCC ACGTCGTCCG AGGGGGAGGG CTCGTGCTGA
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Protein sequence | MAHESPAEFA GDPDDVARLW TPHRMVYIGG QDKPADTSAD ACPFCRIPAR SDADGLVVHR GRTCYVVLNL YPYNPGHLLV CPYRHVADYP DLTQAETHEL AALTATAMRV TRAVSRPDGF NIGLNQGEVA GAGIAAHLHQ HVVPRWSGDS NFLPIVARTK ALPQLLGETR ELLAGAWPQA TSSEGEGSC
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