Gene Bcav_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1980 
Symbol 
ID7858600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2260705 
End bp2261274 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content73% 
IMG OID643866074 
Producthistidine triad (HIT) protein 
Protein accessionYP_002881997 
Protein GI229820471 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000948071 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGCACG AGTCGCCTGC GGAGTTCGCG GGCGATCCCG ACGACGTCGC CCGCCTGTGG 
ACGCCGCACC GGATGGTCTA CATCGGCGGT CAGGACAAGC CGGCCGACAC CAGCGCCGAC
GCCTGCCCGT TCTGCCGGAT CCCGGCACGG TCCGACGCCG ACGGCCTCGT GGTCCACCGG
GGCAGGACGT GCTACGTCGT CCTCAACCTC TACCCGTACA ACCCGGGGCA CCTCCTGGTG
TGCCCGTACC GCCACGTGGC GGACTACCCG GACCTGACGC AGGCGGAGAC GCACGAGCTG
GCGGCGCTCA CGGCGACGGC GATGCGGGTC ACGCGTGCCG TGTCCCGGCC CGACGGGTTC
AACATCGGGC TCAACCAGGG GGAGGTCGCG GGGGCGGGGA TCGCCGCCCA CCTGCACCAG
CACGTGGTCC CGCGGTGGTC CGGGGACTCG AACTTCCTTC CGATCGTCGC CCGCACGAAG
GCCCTGCCGC AGCTGCTCGG CGAGACCCGC GAGCTGCTGG CCGGAGCCTG GCCGCAGGCC
ACGTCGTCCG AGGGGGAGGG CTCGTGCTGA
 
Protein sequence
MAHESPAEFA GDPDDVARLW TPHRMVYIGG QDKPADTSAD ACPFCRIPAR SDADGLVVHR 
GRTCYVVLNL YPYNPGHLLV CPYRHVADYP DLTQAETHEL AALTATAMRV TRAVSRPDGF
NIGLNQGEVA GAGIAAHLHQ HVVPRWSGDS NFLPIVARTK ALPQLLGETR ELLAGAWPQA
TSSEGEGSC