Gene Bcav_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1863 
Symbol 
ID7860485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2126017 
End bp2127426 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content74% 
IMG OID643865954 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_002881881 
Protein GI229820355 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCCT CCGCACCCGC CGACGCCGGC GAGCGCGGGG ACGCGACGTA CGACGTCGTC 
GTCCTCGGGG GCGGGAGCGG CGGCTACGCG GCGGCCCTGC GCGCGGCCCA GCTGGACCTG
CGCGTCGCTC TCGTCGAGTC GGACAAGGTC GGCGGCACGT GCCTGCACCG CGGATGCATC
CCCACGAAGG CTCTCCTGCA CAGCGCGGAG GTGGCCGACG CCGTCCGCGA GAGCGCGACG
TTCGGCGTCC GCGCCAGCCT CGACGGCATC GACATGGCCG CTGTCACCGC GTACCAGGAG
GGCGTGGTCG CCAGGCTGTA CAAGGGCCTC CAGGGGCTGG TCGCCGGGCG CGGCATCGAG
GTCGTCGCCG GCCACGGTCG GCTCGTCGCC CCGGACGCCG TCGAGGTCGC CGGGCGCACG
ATCCGTGGGC GGAACGTCGT GGTCGCGACC GGCTCGTACT CGCGCAGCCT GCCCGGGCTC
GAGATCGGCG GGCGCGTCGT GACGAGCGAC CAGGCACTGC GACTCGACTG GGTGCCGCAG
CGCGTCGTCG TCCTCGGCGG TGGCGTGATC GGCGTCGAGT TCGCGAGCCT GTGGCGGTCG
TTCGGCGCCG AGGTCACGGT CGTCGAGGCA CTCGAGCACC TCGTCCCGAA CGAGGACGTC
GCCCTGAGCA CCGCGCTTGA GCGGGCGTTC CGCAAGCGCG GGATCGGGAT GCGGCTCGGC
GCCCGGTTCG CCGGCGTCGA CCAGGACGAC TCGGGCGTGC GCGTCCACCT GGAGGACAGC
GACGACGTGC TCGCCGCCGA CCTGCTGCTG GTGGCCGTGG GACGCGGTCC CGCCACGGCC
GGCGTCGGCC TCGAGCAGCA GGGTGTCGAG CTCGACCGCG GCTTCGTGGT GACGGACGAG
CGCCTGCGCA CGACGACGTC GGGGGTGTAC GCCGTCGGCG ACGTCGTCGC CGGCCTCCAG
CTCGCGCACC GGGGCTTCGC GCAGGGCATC TTCGTGGCCG AGGAGATCGC CGGCCTCGCA
CCCGCCCCGA TCGTCGAGTC CGGGATCCCC CGCGTCACCT ACAGCGACCC CGAGATCGCG
TCCGTCGGTC TCACCGAGGC CCAGGCACGC GATCGGTACG GCGACGGCGT CGAGACGCTC
GAGTACAACC TCGGCGGCAA CGGCAGGAGC CAGATCCTCC GCACCGCCGG GTTCGTCAAG
CTCGTCCGCG CACCGGAAGG GCCGATCGTC GGCGTCCACG CGATCGGCGC GCGCATGGGC
GAACAGGTCG GCGAGGGCCA GCTGATCGTG AACTGGGAGG CGTTCCCCGA GGACGTCGCC
GCCCTCGTGC ACGCCCACCC CACCCAGAAC GAGGCTCTCG GCGAGGCAGC TCTCGCGCTC
GCCGGCAAGC CGCTCCACGC GCACCACTGA
 
Protein sequence
MAPSAPADAG ERGDATYDVV VLGGGSGGYA AALRAAQLDL RVALVESDKV GGTCLHRGCI 
PTKALLHSAE VADAVRESAT FGVRASLDGI DMAAVTAYQE GVVARLYKGL QGLVAGRGIE
VVAGHGRLVA PDAVEVAGRT IRGRNVVVAT GSYSRSLPGL EIGGRVVTSD QALRLDWVPQ
RVVVLGGGVI GVEFASLWRS FGAEVTVVEA LEHLVPNEDV ALSTALERAF RKRGIGMRLG
ARFAGVDQDD SGVRVHLEDS DDVLAADLLL VAVGRGPATA GVGLEQQGVE LDRGFVVTDE
RLRTTTSGVY AVGDVVAGLQ LAHRGFAQGI FVAEEIAGLA PAPIVESGIP RVTYSDPEIA
SVGLTEAQAR DRYGDGVETL EYNLGGNGRS QILRTAGFVK LVRAPEGPIV GVHAIGARMG
EQVGEGQLIV NWEAFPEDVA ALVHAHPTQN EALGEAALAL AGKPLHAHH