Gene Bcav_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1859 
Symbol 
ID7860481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2121109 
End bp2121765 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content73% 
IMG OID643865950 
Productlipoate-protein ligase B 
Protein accessionYP_002881877 
Protein GI229820351 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.764721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTTCG ACCGCGTCGG TCTCGGCGAC GAGCTCGTGC CGTACCAGGA CGGATGGGCT 
CGCCAGCGCG AGCTCCACGA GTCCGTGGTC GCCGGCGGCG AGGACGTCGT CGTCGAGCTC
GAGCACGAGC ACGTCTACAC GGCCGGCCGA CGCACCCGCC GCGCCGAGCG CCCCGATGAC
GGCACACCGG TCGTCGACGT CGACCGTGGC GGAAAGATCA CCTGGCACGG CCCCGGGCAG
CTCGTCGTCT ACCCGATCGT GCGGCTCGCG CAGCCGGTCG ACGTCGTGGC GTACGTCCGG
GCGCTCGAGT CGGCGCTCAT CGGCACGCTC GGCACCCTCG GGGTGAGCGG AGACCGCGTC
GAGGGGCGAT CGGGCGTGTG GGTGCTGGGC GACGACGGCG GCCCGGATCG CAAGATCGCG
GCGATCGGCG TGCGGGTCGC CGGCGGGGTG ACGATGCACG GACTCGCTCT CAACGTCGCG
CCCGACCTGA CCGCGTTCGA GGCCATCGTG CCGTGCGGGA TCACCGACGC GGGAGTGACG
TCGATCGCCG CCGAGACCGG GCGCACCCTG ACGCTCGTCG AGGTGGCCGA CATCCTCCGA
GACGACCTCG TGCGCGCCCT CGCGGACGTC ACGGCCGTGC GTACAGTGGG CGCGTGA
 
Protein sequence
MRFDRVGLGD ELVPYQDGWA RQRELHESVV AGGEDVVVEL EHEHVYTAGR RTRRAERPDD 
GTPVVDVDRG GKITWHGPGQ LVVYPIVRLA QPVDVVAYVR ALESALIGTL GTLGVSGDRV
EGRSGVWVLG DDGGPDRKIA AIGVRVAGGV TMHGLALNVA PDLTAFEAIV PCGITDAGVT
SIAAETGRTL TLVEVADILR DDLVRALADV TAVRTVGA