Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1818 |
Symbol | |
ID | 7860440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2080687 |
End bp | 2081322 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643865909 |
Product | bifunctional deaminase-reductase domain protein |
Protein accession | YP_002881836 |
Protein GI | 229820310 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.450783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00922336 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCACTCG CCCGCGTCCA CGCCTTCGCG ATCTCCCTCG ACGGATTCGG TACCGGTGCA GGTCAGAGCA AGGACCTTCA CTTCGGTCAC GCCGGTGATC GACTGCACCA GTGGCGGTTC GCCACACAGT CGTGGCAGCA GACCAGTGGG AGCCGTGGCA TCGACAACCT CTTCGCCCTT GAAGCCGGGG CGGAGATCGG TGCCGAGATC ATGGGTGCCG GCAAGTGGGG TCATCCCGGC TGGGAGGACG ATCCGGACTG GAAGGGCGCG TGGGGCGCGA ACCCGCCGTT CCACACCCCC GTCTTCGTCC TCACCCATCA TCCGCGCCCA TCGATCGAGA TGGAGGGCGG CACCACGTTC CACTTCCTCG ACGCCTCACC TGCCGAGGCG CTCGAGCAGG CACGCAAGGC CGCCGATGGC GACGACGTAC GGATCGGCGG CGGGCCCACC GTGATCCGCG ACTTCCTGGC TGCCGGGCTC GTCGACTACA TGAGTGTGGC GATCGTCCCC ATCCTCCTGG GCAGGGGGGT ACGGCTCTGG GACGGGCTCG AAGGCCTGGA GAAGACCTAC GACATCGAGT CCGTCGCGTC GCCGAGCGGC ATCGTGCATG TCACCTTCAC CCGCACCGCG ACCTGA
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Protein sequence | MSLARVHAFA ISLDGFGTGA GQSKDLHFGH AGDRLHQWRF ATQSWQQTSG SRGIDNLFAL EAGAEIGAEI MGAGKWGHPG WEDDPDWKGA WGANPPFHTP VFVLTHHPRP SIEMEGGTTF HFLDASPAEA LEQARKAADG DDVRIGGGPT VIRDFLAAGL VDYMSVAIVP ILLGRGVRLW DGLEGLEKTY DIESVASPSG IVHVTFTRTA T
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