Gene Bcav_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1683 
Symbol 
ID7859625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1930347 
End bp1931585 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content77% 
IMG OID643865771 
ProductAmidohydrolase 3 
Protein accessionYP_002881701 
Protein GI229820175 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.46818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCC AGCTCCTCCG TGGCGGTCGC CTCGCGAGCG GCGAGGTGGT CGACGTCCGT 
GTCGACGCCG ACACCGTCAC CGCCGTCGTG CCAGCCGACG GCGGCAGCGG ACTCGACCGC
GCCGGCGCCG CGGTGACCGA CCTCACCGGG TACGTGCTGT GCGGGGCGTT CGCCGAGCCG
CACACGCACC TCGACAAGGT GTTCACCGCG GACCGGGTCA CCGGTCACGA CGGGACGCTC
CGCGGTGCGA TGGAGCGGTA CGCGACGGTG CTCGGCGAGG CGAGCGACGC CGACGTGCGC
GCCCGCGCGC ACCGGGCGCT GCGTCTCCTG GTCGGCCACG GGGCGACGGC GGTGCGCAGC
CACGTCGGCT GCGGCCGGCT GCTCGGCGTC CGCGCGGTGG AGTCGCTCGT GCGCGTGCGC
TCCGAGGCCG CCGACGTCGT CGACCTGCAG CTCGTCGCGC ACGTCGGTCC GCCCGGTGTC
GGCGAGTCCT GGCGGTCGCA CCGCGCCCGA CTGCACGACG CCCTCGACGC GGGGGCGGAC
GTCGTCGGCG GCAACCCGTC GATCGAGCCG GACCCGGTGG CGGCGATGGA GGAGTGCTTC
GCCGTCGCCG TCGAACGCGG CCGACCCGTC GACTTCCACG TGGACGAGAC GACCGAACCG
GCGGTCCTGA CCCTGCGGCA CCTCGCCCGT CTCGCACGGC AGGCGGACGT GCCCGTGACG
GCGAGCCACT GCGTCTCGCT CGGGCAGCAG GACCCGGCGC TGGCCGCCGA CGTTGCGGCG
GAGGTCGCCG AGGCAGGGGT TCAGGTCGTG GCGTTGCCGG CCACGAACCT CTACCTCCAG
GGCCGTGGCG GCGGCCCCAG CACGCGCGGC CTCACGGCGA TCGACACGCT CCGCGCCGCC
GGCGTGCGCT GCGCCGCCGG AGGAGACAAC GTGCGCGACC CGTTCAACCC CGCGGGCCGG
CTGGACCCGC TCGAGACCGC GGCACTCGTG GTCACGGCCG GGCATCAGGC ACCCCGCGAC
GCGTGGCACA TGGTGGGCCG CGACGCGCGC GCCGTGCTCG GGCTGCCCGC GGCCGGACCG
CGCGTGGGCG ATCGGGCGGA TCTCGTGGCC GTGCGCGCGG ACTCGCTCGA GGACGCGCTC
GCCCTCGCAC CGGCGGAACG CATCGTGTGG CGGGCCGGTC GCGTCGTGTC GCGCATCGCC
GTCACCCGGC GCGGCCCGGT GCACGAGGTC GGCGCATGA
 
Protein sequence
MTVQLLRGGR LASGEVVDVR VDADTVTAVV PADGGSGLDR AGAAVTDLTG YVLCGAFAEP 
HTHLDKVFTA DRVTGHDGTL RGAMERYATV LGEASDADVR ARAHRALRLL VGHGATAVRS
HVGCGRLLGV RAVESLVRVR SEAADVVDLQ LVAHVGPPGV GESWRSHRAR LHDALDAGAD
VVGGNPSIEP DPVAAMEECF AVAVERGRPV DFHVDETTEP AVLTLRHLAR LARQADVPVT
ASHCVSLGQQ DPALAADVAA EVAEAGVQVV ALPATNLYLQ GRGGGPSTRG LTAIDTLRAA
GVRCAAGGDN VRDPFNPAGR LDPLETAALV VTAGHQAPRD AWHMVGRDAR AVLGLPAAGP
RVGDRADLVA VRADSLEDAL ALAPAERIVW RAGRVVSRIA VTRRGPVHEV GA