Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1613 |
Symbol | |
ID | 7858809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1854294 |
End bp | 1855946 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643865700 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_002881631 |
Protein GI | 229820105 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTGGA TGGCCTCGTC GACGCTCCTC ACCCACGCCC TCGCGCTCGC GGGGCAGCTC GACGCGCCCA GCGCGCTCGA GGAGCTCCTG GCGGCGGCCC GGACGCACAC GGGCGCGACC TACGCGGCGA TCGCCGTCCT CGACCCGTAC GGCGAGACGA ACACGTTCAT GCACCGCGGG ATGAGCAGCG AGGTGGTCGC CGCTCTCCCG CACCCTCCCC GCGGCCACGG GGTGCTCTCC GCGATCCCGG CGGACGGCGT CCTCGTGCTC GACGACCTCA CGGCCGCCCC GGAGTTCGAG GGCTTCCCGG CCGGTCATCC GCCGATGCGC ACGTTCCTCG GCGCGTCGGT GAGCGTCGGG GACGTGCTGC TCGGCCGGCT GTACCTGACG GAGAAGCCCG GCGGCTTCAC CGACGAGGAT GTCGAGACGG TCGAGCTGCT CGCCGCGGCG GCCGGGATCG CGATCGAGAA CGCCCGCTTG TACGGCGAGG CGGCGCGGCG CGAACGCTGG CGCTCGGTGT CCCAGGAGAT CACCGCCGCG CTCCTCGAGG GGTCCGACGA GGAGGAGGTG CTGCCGCTCG TGGCGCGCCG GCTGCGCGAG GCCGCCGACG CCGACACCGC GGTCATCGTC CTGCCCTCCC TCGACGGCGC CTGGGTGGCC GAGATCGTCG ACGGCGTGGG CGCGGCCGAC CTCGTGGGGT CGGCGTTGCC CCCGTCCGGT CCCGCGATGG AGACCCTCCG GACGGGCGCG GGCAAGCTCG TCGACTCCAT CTCGCGCGAG GCCGACCGGT TCATCCCGCA GGCGCGCCGG TTCGAGCGCG CCCTGTACGC GCCCCTGCGC GCGTCCCGCG CCGACGACGA CGCACCCAGC CTCGGCGTCC TCATCCTGTT CCGGCTGCCC GGCCGGCTCC CGTTCACCGG TGGCGACCTC GCCATCGCCG AGGACGTCGC CGCCCAGGCC GCTCTGGCGC TGCGGCTCGC CGCGGCCCGC CACGCCGAGG ACGTCGCGAC GCTGCTCGGC GAGCGGGCTC GCATCGCCCG CGACCTGCAC GACCTCGCGA TCCAGCAGCT GTTCGCCACC GGCATGCGGC TCGAACGCGC GGCGACGACC GCCGCGGCGG CGGAGCGCGC GCTCATCGAG GAGTCGATCG CGGACGTCGA CGAGAGCGTC CGCCAGATCC GCGGCATCGT GCGGTCCCTG CGCGACCGGG ACGAGCACCT TCCGGTGGTC GAACGGCTGG TGCAGGAGGC GTCGATCGCG CGGACGGCGC TCGGGTTCGC GCCGTCGATG CTGCTCACCC TGGACGGCGC ACCGATGCAC GACGTCGAGC CGCGGGGCGA CGCGGCCACG GAGATCGCGG CCCGCCTCGG CGAGCAGGCC GCCGACGACG TCGTCGCCGT CGTGCGCGAG GGCCTCGCCA ACGTCGCCCG TCACGCGCGT GCGACGAGCG CGCAGGTCGA GGTCGCCGTC GAGCCGCGCC AGGTCCGTGT CGTCGTCACC GACGACGGCG TGGGTCCCGA CCCCGACCCG GAGCGTCGAT CCGGGCTCGC GAACCTCGAG GCTCGGGCCC GCGACGCGCA CGGCTCCTCC CGGCTGACGC CGGGCCCCGG GGGCCGCGGC AGCGTCCTGC GGTGGGCGGC CCTGCTCGAC TAG
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Protein sequence | MTWMASSTLL THALALAGQL DAPSALEELL AAARTHTGAT YAAIAVLDPY GETNTFMHRG MSSEVVAALP HPPRGHGVLS AIPADGVLVL DDLTAAPEFE GFPAGHPPMR TFLGASVSVG DVLLGRLYLT EKPGGFTDED VETVELLAAA AGIAIENARL YGEAARRERW RSVSQEITAA LLEGSDEEEV LPLVARRLRE AADADTAVIV LPSLDGAWVA EIVDGVGAAD LVGSALPPSG PAMETLRTGA GKLVDSISRE ADRFIPQARR FERALYAPLR ASRADDDAPS LGVLILFRLP GRLPFTGGDL AIAEDVAAQA ALALRLAAAR HAEDVATLLG ERARIARDLH DLAIQQLFAT GMRLERAATT AAAAERALIE ESIADVDESV RQIRGIVRSL RDRDEHLPVV ERLVQEASIA RTALGFAPSM LLTLDGAPMH DVEPRGDAAT EIAARLGEQA ADDVVAVVRE GLANVARHAR ATSAQVEVAV EPRQVRVVVT DDGVGPDPDP ERRSGLANLE ARARDAHGSS RLTPGPGGRG SVLRWAALLD
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