Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1601 |
Symbol | |
ID | 7858797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1844454 |
End bp | 1845170 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643865688 |
Product | ABC transporter related |
Protein accession | YP_002881619 |
Protein GI | 229820093 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.122919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTAGCA AGACCAGAGC GCCACGCTCC ACCGCCGTCC TGCGCGCCTC GGGCGTTCTC GTCGGCTACG GCGCCGGCCG CGAGTCCGCC GTCTGCCCCC CGATCGACGT GACGCTGAAC GCCGGCAAGG CGCTCGCCGT CGTCGGCGCG AACGGGACCG GGAAGTCGAC GTTCCTGCGG GCCGCGATCG GGCTCCTCGA ACCGTTCGCC GGCTCGATCG AGGTGCTCGG GGCGCCCGTC GACGAGCGCG ACGCCGCCTT CCGCGCGGGC GTCGCGAGCG TCCTCGACGA CGACGCGTAC TTCCCCGCGC TGACCGTGCG CGAGCACCTG CTCCTCGTGG CGCGCGGGCA CGGCGTGCAG GGGGCGAGCG CGCTCGTCAC CGAGCTCGTC GAGGAGTTCG GGCTGACGGA CCGGGCCAAG GCGATCCCGA CGGCGCTCTC CTCCGGGCAG CGGCGCCGGC TGCTGCTCGC CGCCGGGCTC GTGCGGCCGC GGAAGCTCCT CGTCCTCGAC GAGCCGGAGC AGCGGCTCGA CGTCGGCATG CGCGACCGGC TCGCCGAGCG GCTGACGGCG GAGTGCGCAG CGGGCGGGTC CGTGCTCATG GCCACGCACG ACCCGGTGCT CGTGCGCAGC GTCGCCCACT CCGCGCTGCT CATCGCCGAG GACGCCGTCC GCCGGATCTC GCCCGACGAG GCCGCGCGCG CGATCGAGGC GCTGTGA
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Protein sequence | MPSKTRAPRS TAVLRASGVL VGYGAGRESA VCPPIDVTLN AGKALAVVGA NGTGKSTFLR AAIGLLEPFA GSIEVLGAPV DERDAAFRAG VASVLDDDAY FPALTVREHL LLVARGHGVQ GASALVTELV EEFGLTDRAK AIPTALSSGQ RRRLLLAAGL VRPRKLLVLD EPEQRLDVGM RDRLAERLTA ECAAGGSVLM ATHDPVLVRS VAHSALLIAE DAVRRISPDE AARAIEAL
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