Gene Bcav_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1563 
Symbol 
ID7859719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1795160 
End bp1795864 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content76% 
IMG OID643865648 
Producttranscriptional regulator, MerR family 
Protein accessionYP_002881581 
Protein GI229820055 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.246216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.968218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GGGACGTCGC CGGGCCGGCC GGTGTGTCGA CCCAGCACGT CCGCGACCTG 
GAGCGCCTCG AGATCATCCC GAGGTCGGTC AGGTCAGCCA ACGGCTACCG GTCCTACACG
CGGACCCACA GCACCGCCGT CGTCGCCTAT CGCGCCCTGG TGGCCGGCTT CGGCGTCGCG
CAGGCGCGGG CGGTGATGCG TGCCGTGACG GCCGACGACG TCGAGCGCGC TCTCGAGCTG
GTCGACCTCG GTCACGTGGC ACAGCAGGGA GCGCGGGAGA CGGTGCGGCT CGCGTCCCGC
GCCCTCGACG CGCTCGCGGC CGAGCCGGAG CGCGACGTGC GTGCCGAGGA CGACATGACG
GTCGGCGAGC TCGCCGGCGC CCTGGGCGTG CGGACCTCGA CCCTGCGGTC GTGGGAGGCG
TACCGGCTGC TCGTCCCGGC CCGCGACGCA CGTTCCGGGC ACCGCCGGTA CTCGCCCGAC
ATCGTCCGCG CCGCGCGCAT CGTGCACCAG CTGCGCCTGC AGGGGGTGCG GCCGGCCCAG
ATCCGCGCCG TGCTCGCGGC CGCGCCCGCG GGGGGCGAGG TCGTCGAGCT GCGACGGGTC
ATGGCCGAGC GCCGGGGCGC CCTGGGGGCG GCGTCGCTCG CGATGCTGGA CGCGGCGGCG
GCCCTGCGCG ACCATCTGGC GGCCCGGCAG GCGGATACGT CCTAG
 
Protein sequence
MRIGDVAGPA GVSTQHVRDL ERLEIIPRSV RSANGYRSYT RTHSTAVVAY RALVAGFGVA 
QARAVMRAVT ADDVERALEL VDLGHVAQQG ARETVRLASR ALDALAAEPE RDVRAEDDMT
VGELAGALGV RTSTLRSWEA YRLLVPARDA RSGHRRYSPD IVRAARIVHQ LRLQGVRPAQ
IRAVLAAAPA GGEVVELRRV MAERRGALGA ASLAMLDAAA ALRDHLAARQ ADTS