Gene Bcav_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1530 
Symbol 
ID7859686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1755742 
End bp1757760 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content73% 
IMG OID643865615 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_002881548 
Protein GI229820022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.075168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTCG CACGATCCGC CGTCGCCGTC CTGAGCACGC TCGCCGTCGC GGCGCTCGGG 
CTCACCCTCG CTGTCACGCC CGCGGCCGCC GGTGGCGGCG GGTCGGGAGG CGGCTCGGGA
GGCGGCTCGG GGGGTGGCGG CCCGAGCCTC CGCGTGGCCA CGTTCAACGC GTCGCTGAAC
CGCGCCGCCG CCGGCGAGCT CGTGGCCGAC CTCAGCACGC CCGACGACGC GCAGGCCGCC
ACGATCGCCG AGATCCTCCA GCGCAACCGG CCCGACGTCG TCCTCCTCAA CGAGTTCGAC
TACGTGCCGG ACCACGTCGC CGTCGACCTG TTCCGCGACA ACTACCTCGA GGTCTCCCAG
GGCGGCGCCG AGCCGATCGA GTACCCGTAC GCGTACGTGG CGCCGTCGAA TACCGGCATC
CCGAGCGGGT TCGACCTCAA CAACGACGGG ACCGTGGGCG GCGGCGACGA CGCCCTGGGG
TTCGGGCTGT TCGAGGGGCA GTACGGCATG GTCGTGCTGT CGCGCTACCC GATCGTGGAG
CGCGACGTGC GGACGTTCCA GACGTTCCTG TGGAAGGACA TGCCCGGCGC TCTGTTGCCG
GACGACCCGG CCACGCCCGA GCCCGCGGAC TGGTTCACGC CCGAGGAGCT CGACGTCGTG
CGGCTCTCCA GCAAGTCGCA CTGGGACGTG CCGGTGCGGG TCGGCCGCGA CACGGTGCAC
GTGCTCGCCT CGCACCCCAC GCCGCCCACG TTCGACGGCC CGGAGGACCG CAACGGCCTG
CGCAACCACG ACGAGATCCG GTTCTGGGCC GACTACGTCA CACCCGGCAG GGCGTCGCGC
TACATCGTGG ACGACGACGG CGAGCGCGGC GGTCTGTCGC GGAACGCCTC GTTCGTCGTG
GTCGGGGACC AGAACGCCGA CCCGCTCGAC GGTGACTCCG TGGACGCCGC GATCGACCAG
CTGCTCGACC ACCGCTGGAT CACCGACCCG CTGCCGACGT CGGACGGCGC CGTCGAGGCG
GCGTCGCTGC AGGGCGGGGC CAACACCGCC CACGCCGGTG ACCCGGCGTA CGACACGGCG
GACTTCGCCG ACACCGCGCC CGGGAACCTC CGCGCCGACT ACGTGCTGCC CTCGCGCGAC
CTGCGCGTGC GCGACGCCGG CGTGTTCTGG CCCGTGGCGG CCGATCCGCT GTCCAGACTG
ACGGGCGTGT TCCCGTTCCC GAGCAGCGAC CACCGGCTCG TGTGGGTGGA CCTCGGCGAC
CCGGTGCTGG GCGAGCCGCT CGCGCAGGCG CACGCGCACA ACGACTACGA GCACGACCGG
CCGCTGTACG ACGCGCTCGA GCACGGCTTC ACGAGCGTCG AGGCAGACGT ATGGCTGGTG
GACGGCGAGC TGCTCGTGGC GCACGACGCC GTCGACCTCG ACCCCGAGCG CACGCTCGAG
AGCCTCTACC TCGACCCGCT CGACGAGCTC GTGCGCGGCA GGCACGACAG CGTGTACCCG
CGGTGGGACG GGACGTTCCA GCTCCTCATC GACATCAAGA CCGAGGCCGA GAGCACGTAC
GCCGCGATCG AGGCCGCGCT CGGCGAGCAT CGCGACCTCT TCGCGCGGTA CTCCCGCGGC
CGCGTGCACG ACGGCCCCGT CCGGGCGGTG ATCAGCGGGA ACCGCCCGCT CGAGACGATG
GCCGCGGCTG ACCGCCGCTA CGGCTTCTAC GACGGCCGCT CCGGCGACCT CGGCTCAGGC
CTGCCAGCGT CCCTCATGCC GCTCGTGAGC GACAACTGGG CGAACCTGTT CACGTGGCAG
GGCGTGGGGG AGATGCCCGC CGGCGAGCGG GACGCCCTGC ACGCCTACGT CGCGCAGGCG
CACGACGCCG GGTACCGCGT GCGCTTCTGG AACACGCCGG ATGCGGCCGG CCCGGCTCGG
GACGCGGTGT GGGCCGAGCT GCGCGACGCC GGCGTCGACC ACATCAACAC CGACGACCTC
GCCGGCCTGG AGGCGTTCCT CGACGACGAC GACGCCTGA
 
Protein sequence
MAVARSAVAV LSTLAVAALG LTLAVTPAAA GGGGSGGGSG GGSGGGGPSL RVATFNASLN 
RAAAGELVAD LSTPDDAQAA TIAEILQRNR PDVVLLNEFD YVPDHVAVDL FRDNYLEVSQ
GGAEPIEYPY AYVAPSNTGI PSGFDLNNDG TVGGGDDALG FGLFEGQYGM VVLSRYPIVE
RDVRTFQTFL WKDMPGALLP DDPATPEPAD WFTPEELDVV RLSSKSHWDV PVRVGRDTVH
VLASHPTPPT FDGPEDRNGL RNHDEIRFWA DYVTPGRASR YIVDDDGERG GLSRNASFVV
VGDQNADPLD GDSVDAAIDQ LLDHRWITDP LPTSDGAVEA ASLQGGANTA HAGDPAYDTA
DFADTAPGNL RADYVLPSRD LRVRDAGVFW PVAADPLSRL TGVFPFPSSD HRLVWVDLGD
PVLGEPLAQA HAHNDYEHDR PLYDALEHGF TSVEADVWLV DGELLVAHDA VDLDPERTLE
SLYLDPLDEL VRGRHDSVYP RWDGTFQLLI DIKTEAESTY AAIEAALGEH RDLFARYSRG
RVHDGPVRAV ISGNRPLETM AAADRRYGFY DGRSGDLGSG LPASLMPLVS DNWANLFTWQ
GVGEMPAGER DALHAYVAQA HDAGYRVRFW NTPDAAGPAR DAVWAELRDA GVDHINTDDL
AGLEAFLDDD DA