Gene Bcav_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1322 
Symbol 
ID7858785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1500603 
End bp1501613 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content73% 
IMG OID643865406 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002881343 
Protein GI229819817 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA TCGGGGACGT GGCACGGGTC GCCGGCGTGT CGACGTCGAC CGTGTCGTAC 
GTGCTCTCGG GCAAGCGCCC GATCTCCGGC TCCACGCGCG AACGCGTCGA GCGGGCGATC
CGCGACCTCG GATACCGGCC GCACGCCGGC GCCCGGGCGC TCGCCTCGGC CCGCACGAAC
GTCCTCGGAC TCATGGCGCC GCTGCGCGCG GACGTCAACG TCTCCGTCAT CATGCAGTTC
GTGACCGGCG TGGTCACCGC CGCGCGCAAC CACGACCGCG ACGTCCTGCT CCTGACCTCG
GACGAGGTCG CAGGCACCGA GCGCGTCGCG AACGGCTCGA TGGTGGACGC GCTCATCATG
ATGGACGTCG AGTCCGACGA CGCGCGCATC GACGTGCTCG TCGGCCTGCG GCAGCCCGCT
GTCCTCATCG GCCTGCCGCA GGACCCGCAG GGCCTCTCCT GCGTGGACCT GGACTTCGAC
GCGGCCGGGC GCCTCGCGGT GCGGCACCTG ACCGCGCTCG GCCACCGTCG GGTGGCTCTG
ATCGGCTCGC CGCAGCTTGT GCTGGACCGG CACACCTCCT ACGCGATCCG CCTGCGCCAC
GGCTTCGCCG AGCAGGCGGA CGCAGCCGGG CTGACCCACC TGTCGGTGCC GTGCTCGTCG
ACGCCGGCCG GTGCCGCCGA CGCCGTCGAC GCCGTGCTGG AGGCGATGCC GGACGTGACG
GCCCTCGTCG TCCACAACGA GGTCGCGCTG CCGTGGGTGC TCACCACGCT CGCCGAACGC
GGACGCCGTG TGCCGCAGGA GATCTCCGTC GTCGCCGTGT GCCCCCGCGA CGTCGCGCTC
GGGCAGCGTC TGCCCCTGAC GAGCATCGAC ATCCCCGGCT ACGCCATCGG CCAGGTCGCC
GTCGAGATGG CGATGGCGCG CCTCGCCGAA CCCGGCACCG ACCGCCCCGC GGAGACCCGG
CTGCTCACGC CGACGCTCGA GGCGCGCGAG AGCACCACCG CACCCACCTG A
 
Protein sequence
MATIGDVARV AGVSTSTVSY VLSGKRPISG STRERVERAI RDLGYRPHAG ARALASARTN 
VLGLMAPLRA DVNVSVIMQF VTGVVTAARN HDRDVLLLTS DEVAGTERVA NGSMVDALIM
MDVESDDARI DVLVGLRQPA VLIGLPQDPQ GLSCVDLDFD AAGRLAVRHL TALGHRRVAL
IGSPQLVLDR HTSYAIRLRH GFAEQADAAG LTHLSVPCSS TPAGAADAVD AVLEAMPDVT
ALVVHNEVAL PWVLTTLAER GRRVPQEISV VAVCPRDVAL GQRLPLTSID IPGYAIGQVA
VEMAMARLAE PGTDRPAETR LLTPTLEARE STTAPT