Gene Bcav_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1304 
Symbol 
ID7858767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1480472 
End bp1481287 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content74% 
IMG OID643865388 
ProductATP synthase F1, delta subunit 
Protein accessionYP_002881325 
Protein GI229819799 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.141889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGT CGAGCGAGGC GTCCCTCAAG GCAGCGGCGG ACCGGTGGGA GCCGGTCCTC 
GCCGAGGCAG GGGAGTCCGC GCGCGACCTC GCGGAGAGCA TCTTCGCCGT TGTCGACGCG
CTCGACTCTT CGGCATCCCT GCGCCGTGCG CTGACGGACC CGGCGCGGCC GGCGGACGCG
AAGGCGAGCC TCACCCAGGG CTTGCTCGGC GCGAAGGCGC CGGACGCCGT CGTCGATCTC
GTGGCCGGCA TGAGCCGTTC GCGCTGGTCG GCGGACGACG ACCTGGCGTC GGCGCTCGAG
GAGATCGGCA CCACGTCGCT GCTGGCGGCC GCGGAGTCGC GCGGTGAGCT CGAGCGGGTC
GAGGACGAGC TGTTCCGGCT CGGGCGCTCG CTGATCGGCG CGCGCGAGCT GCGGATCGCC
CTGTCGAACC GTGAGCTGCC GGTCGAGAAC CGGGTCGCGC TCGTCGACGC CTTGCTCGAG
GGAAAGGTCG CGCCGGAGAC GGAGCTGCTC GTGCGGCGCG CGGCGACGTC GATGCGGGAA
CGTTCCGTCC CGAACGCGAT CGCGCACGTC GGCGAGCTCG CCGCTGCGCG GCGCCGCCGG
CTCGTCGCGG CGGTCACGGC TGCCGTGCCC CTCACCCAGG GTCAGCTCAC GCGCCTGGGT
GAGATCCTGG AGCGTGCGTA CGGCCGCTCC GTCCAGATCA ACGTCGGGAT CGACCCCGAG
GTGGTCGGCG GCCTGCGGGT GCAGGTCGGC GCCGAGGTCG TCGACGCGAC AGTGCTGACC
AAGCTCGAGG AGGCGCGGCG CCGGCTCGCC GGTTGA
 
Protein sequence
MRASSEASLK AAADRWEPVL AEAGESARDL AESIFAVVDA LDSSASLRRA LTDPARPADA 
KASLTQGLLG AKAPDAVVDL VAGMSRSRWS ADDDLASALE EIGTTSLLAA AESRGELERV
EDELFRLGRS LIGARELRIA LSNRELPVEN RVALVDALLE GKVAPETELL VRRAATSMRE
RSVPNAIAHV GELAAARRRR LVAAVTAAVP LTQGQLTRLG EILERAYGRS VQINVGIDPE
VVGGLRVQVG AEVVDATVLT KLEEARRRLA G