Gene Bcav_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1254 
Symbol 
ID7859565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1427192 
End bp1428127 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content77% 
IMG OID643865338 
Producthypothetical protein 
Protein accessionYP_002881276 
Protein GI229819750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.100866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC GGACCAGCCC ACCACTCCGT CCCGAGCCCG TGCAGGGTCC CGGGCACACC 
GCGAGCGCGG CCGACGCCGT CGTCCGGGCC ATCGCGTTCG CCGCACTCGC GGTGGCCATG
GCCGTCCTCG CCACGGTGCT GGCGTCCCGC GGTCTGGACC TGATCCAGGG GCGGCGATCC
GTGGACTCCC TCGTGGGCGC CGCGGCCGTC GCCGTCGGAT CAGCGGTCGC CGCCTGGTAC
GCCGTGGCCG CAGTCGTCAG CGCCGTCGGA TGGTCGGCTC GAGCGGCGGG ACGCGCGTGG
CGCAGCGGCG AACGCGCCCT GCGGCGCTGG GGACCGCCCG CGATGCGCGG TGCGCTCGGC
CTCGGGATCG CCGCCACCGT CGGCACCGGA CTCTTCCTCG CTCCGGCCGC GAGCGCCGTC
GGCGGGAACG TCGGGTCCGC ACCGTTCCCG GCCTCGGAGG CGCCACCCGA CGACGTCGGC
TACATCCCGT CCGATCCGTC ACCAGCACCC TCGAACGACG CGCACGGGCA GGTCGACGGC
AAGGACGGGC AACCGTCCGG TCCGTCGATC CCGGCGCCGT CGCCCGGACC CGCCGCCTCG
CCACCGCAGG ACGGGCGCGG CGCCTCCACC GGCCCGGCGC TCAGCGGTGC GCCGTCGCCG
GACGGTGCGG AGCCGACGCC GTCCGCCACC GAGGGCGTCC CGCCGGGAGC GCGTGCGACC
TCGCACGGCG CCGAACGAGC TGCGCCGACG CACGTCGTCG CCGCCGGCGA GTCGCTGTGG
GAGATCGCCG AGCAGGCGTT GCCCGCCGGA GCCGAGGACG CCGACGTCGC CGCAGCGTGG
CCGCGCTGGT TCGAGGCGAA CCGCGCCGTC GTCGGTGACG ATCCGGACCT CATCCTCCCG
GGTCAGGTCC TCGTCGTGCC GGAGGCGGAC CGATGA
 
Protein sequence
MTVRTSPPLR PEPVQGPGHT ASAADAVVRA IAFAALAVAM AVLATVLASR GLDLIQGRRS 
VDSLVGAAAV AVGSAVAAWY AVAAVVSAVG WSARAAGRAW RSGERALRRW GPPAMRGALG
LGIAATVGTG LFLAPAASAV GGNVGSAPFP ASEAPPDDVG YIPSDPSPAP SNDAHGQVDG
KDGQPSGPSI PAPSPGPAAS PPQDGRGAST GPALSGAPSP DGAEPTPSAT EGVPPGARAT
SHGAERAAPT HVVAAGESLW EIAEQALPAG AEDADVAAAW PRWFEANRAV VGDDPDLILP
GQVLVVPEAD R